Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S2P59780 AC004945.1-201ENST00000416738 983 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 PCED1CP-201ENST00000419887 785 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 TMEM198B-204ENST00000484016 896 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S2P59780 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S2P59780 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.12□□□□□ -0.31
AP3S2P59780 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
AP3S2P59780 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 AL607033.1-201ENST00000623900 1599 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
AP3S2P59780 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 AC130686.1-201ENST00000622936 2466 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 FOSL1P1-201ENST00000511041 816 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 AC022447.6-201ENST00000515522 438 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.11□□□□□ -0.31
AP3S2P59780 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
AP3S2P59780 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.11□□□□□ -0.31
AP3S2P59780 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 NPAP1P7-201ENST00000613027 823 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 AL161645.1-201ENST00000622716 1255 ntBASIC13.11□□□□□ -0.31
AP3S2P59780 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP3S2P59780 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.11□□□□□ -0.31
AP3S2P59780 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S2P59780 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S2P59780 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
AP3S2P59780 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms