Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AL138799.1-201ENST00000448213 1675 ntBASIC13.52□□□□□ -0.25
SLC25A1P53007 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SLC25A1P53007 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
SLC25A1P53007 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SLC25A1P53007 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 AL137783.1-201ENST00000623494 1896 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC25A1P53007 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC25A1P53007 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SLC25A1P53007 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 NUS1P3-201ENST00000423502 862 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC25A1P53007 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 FAM86LP-201ENST00000478302 853 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC25A1P53007 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.51□□□□□ -0.25
SLC25A1P53007 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC25A1P53007 RARRES2P5-201ENST00000564013 466 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.51□□□□□ -0.25
SLC25A1P53007 AC107373.2-201ENST00000607735 490 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC25A1P53007 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC25A1P53007 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC25A1P53007 AC023090.2-201ENST00000625182 2110 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 AL354702.1-201ENST00000442006 1960 ntBASIC13.51□□□□□ -0.25
SLC25A1P53007 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SLC25A1P53007 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC25A1P53007 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 MIR943-201ENST00000401286 94 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms