Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 CD8B2-202ENST00000417670 633 ntBASIC14.78□□□□□ -0.04
PDX1P52945 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 CALR4P-201ENST00000431943 946 ntBASIC14.78□□□□□ -0.04
PDX1P52945 MTX1P1-201ENST00000440904 838 ntBASIC14.78□□□□□ -0.04
PDX1P52945 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.78□□□□□ -0.04
PDX1P52945 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.78□□□□□ -0.04
PDX1P52945 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 AP006547.1-201ENST00000563435 692 ntBASIC14.78□□□□□ -0.04
PDX1P52945 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.78□□□□□ -0.04
PDX1P52945 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 AC105250.1-201ENST00000509378 2057 ntBASIC14.78□□□□□ -0.04
PDX1P52945 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDX1P52945 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PDX1P52945 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDX1P52945 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.77□□□□□ -0.04
PDX1P52945 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.77□□□□□ -0.04
PDX1P52945 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDX1P52945 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDX1P52945 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.77□□□□□ -0.04
PDX1P52945 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PDX1P52945 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.77□□□□□ -0.05
PDX1P52945 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.77□□□□□ -0.05
PDX1P52945 HOMER2P2-201ENST00000451621 847 ntBASIC14.77□□□□□ -0.05
PDX1P52945 IGHJ2P-201ENST00000454480 60 ntBASIC14.77□□□□□ -0.05
PDX1P52945 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.77□□□□□ -0.05
PDX1P52945 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.77□□□□□ -0.05
PDX1P52945 RHOQP1-201ENST00000555758 579 ntBASIC14.77□□□□□ -0.05
PDX1P52945 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
PDX1P52945 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.77□□□□□ -0.05
PDX1P52945 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 AL096828.3-201ENST00000615354 462 ntBASIC14.77□□□□□ -0.05
PDX1P52945 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.77□□□□□ -0.05
PDX1P52945 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.77□□□□□ -0.05
PDX1P52945 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.77□□□□□ -0.05
PDX1P52945 AC009090.5-201ENST00000624886 2285 ntBASIC14.77□□□□□ -0.05
PDX1P52945 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.77□□□□□ -0.05
PDX1P52945 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PDX1P52945 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDX1P52945 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDX1P52945 AC018735.1-201ENST00000437208 1502 ntBASIC14.76□□□□□ -0.05
PDX1P52945 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 AC090616.6-203ENST00000579186 1945 ntBASIC14.76□□□□□ -0.05
PDX1P52945 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 AC087481.3-201ENST00000602886 1894 ntBASIC14.76□□□□□ -0.05
PDX1P52945 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms