Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL355385.1-201ENST00000606123 409 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 MIR8072-201ENST00000614241 80 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RNF144AP50876 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 AL390755.1-201ENST00000623716 2027 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RNF144AP50876 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 ST20-AS1-201ENST00000560255 4223 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 AC138969.3-201ENST00000546612 1459 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 AC138932.2-201ENST00000548268 1459 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 AC126755.4-201ENST00000549796 1459 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 AC117489.1-201ENST00000625169 3217 ntBASIC14.22□□□□□ -0.13
RNF144AP50876 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.22□□□□□ -0.13
RNF144AP50876 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF144AP50876 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF144AP50876 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
RNF144AP50876 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.22□□□□□ -0.13
RNF144AP50876 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF144AP50876 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RNF144AP50876 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.22□□□□□ -0.13
RNF144AP50876 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 BTBD7P1-201ENST00000447253 1453 ntBASIC14.22□□□□□ -0.13
RNF144AP50876 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RNF144AP50876 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF144AP50876 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF144AP50876 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF144AP50876 SNX18-202ENST00000343017 3140 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RNF144AP50876 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 OR2I1P-209ENST00000641730 5365 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 GRK6P1-201ENST00000400595 1711 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 AC232323.1-201ENST00000540724 2099 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 REXO1L5P-201ENST00000622260 2098 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RNF144AP50876 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.21□□□□□ -0.13
RNF144AP50876 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF144AP50876 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF144AP50876 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF144AP50876 BCRP1-201ENST00000444246 691 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF144AP50876 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF144AP50876 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RNF144AP50876 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF144AP50876 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms