Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBP50607 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TUBP50607 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TUBP50607 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBP50607 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBP50607 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 TMBIM7P-203ENST00000641617 1718 ntBASIC16.05■□□□□ 0.16
TUBP50607 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TUBP50607 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 KRT8P35-201ENST00000483942 1338 ntBASIC16.05■□□□□ 0.16
TUBP50607 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 ACTBP8-201ENST00000403258 1108 ntBASIC16.05■□□□□ 0.16
TUBP50607 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 C2orf27AP3-201ENST00000434123 579 ntBASIC16.05■□□□□ 0.16
TUBP50607 CTBP2P5-201ENST00000454986 1264 ntBASIC16.05■□□□□ 0.16
TUBP50607 FO681548.1-201ENST00000455617 1132 ntBASIC16.05■□□□□ 0.16
TUBP50607 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBP50607 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.05■□□□□ 0.16
TUBP50607 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TUBP50607 AL354718.3-201ENST00000616414 581 ntBASIC16.05■□□□□ 0.16
TUBP50607 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBP50607 CR382287.1-201ENST00000623954 586 ntBASIC16.05■□□□□ 0.16
TUBP50607 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TUBP50607 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBP50607 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TUBP50607 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBP50607 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBP50607 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBP50607 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TUBP50607 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TUBP50607 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TUBP50607 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBP50607 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBP50607 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBP50607 AC104457.1-201ENST00000401024 814 ntBASIC16.04■□□□□ 0.16
TUBP50607 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBP50607 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.04■□□□□ 0.16
TUBP50607 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBP50607 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBP50607 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TUBP50607 FTH1P14-201ENST00000482930 551 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms