Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CENPAP49450 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CENPAP49450 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 AC254562.1-201ENST00000417586 456 ntBASIC13.91□□□□□ -0.18
CENPAP49450 TARDBPP1-201ENST00000442013 1203 ntBASIC13.91□□□□□ -0.18
CENPAP49450 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 SERBP1P3-201ENST00000459980 809 ntBASIC13.91□□□□□ -0.18
CENPAP49450 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.91□□□□□ -0.18
CENPAP49450 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 AC011467.4-201ENST00000594891 528 ntBASIC13.91□□□□□ -0.18
CENPAP49450 AP001059.3-201ENST00000619053 235 ntBASIC13.91□□□□□ -0.18
CENPAP49450 LINC00628-201ENST00000628516 1289 ntBASIC13.91□□□□□ -0.18
CENPAP49450 AL645728.2-202ENST00000641679 227 ntBASIC13.91□□□□□ -0.18
CENPAP49450 AC134684.3-201ENST00000641758 218 ntBASIC13.91□□□□□ -0.18
CENPAP49450 CICP11-201ENST00000434745 2827 ntBASIC13.91□□□□□ -0.18
CENPAP49450 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CENPAP49450 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CENPAP49450 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.9□□□□□ -0.18
CENPAP49450 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.9□□□□□ -0.18
CENPAP49450 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.9□□□□□ -0.18
CENPAP49450 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.9□□□□□ -0.18
CENPAP49450 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.9□□□□□ -0.18
CENPAP49450 AC004449.1-201ENST00000564240 433 ntBASIC13.9□□□□□ -0.18
CENPAP49450 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.9□□□□□ -0.18
CENPAP49450 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.9□□□□□ -0.18
CENPAP49450 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CENPAP49450 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 PTENP1-202ENST00000532280 3996 ntBASIC13.9□□□□□ -0.18
CENPAP49450 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms