Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SIX6O95475 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.79□□□□□ -0.36
SIX6O95475 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SIX6O95475 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 TPT1P11-201ENST00000458482 498 ntBASIC12.79□□□□□ -0.36
SIX6O95475 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.79□□□□□ -0.36
SIX6O95475 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.79□□□□□ -0.36
SIX6O95475 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.79□□□□□ -0.36
SIX6O95475 AL136982.4-201ENST00000437689 1740 ntBASIC12.79□□□□□ -0.36
SIX6O95475 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 AC004241.5-201ENST00000623870 2448 ntBASIC12.79□□□□□ -0.36
SIX6O95475 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.79□□□□□ -0.36
SIX6O95475 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SIX6O95475 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.79□□□□□ -0.36
SIX6O95475 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SIX6O95475 MEX3B-202ENST00000558133 4333 ntBASIC12.79□□□□□ -0.36
SIX6O95475 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 KRT8P24-201ENST00000560290 1559 ntBASIC12.78□□□□□ -0.36
SIX6O95475 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 RCN1P1-201ENST00000400413 996 ntBASIC12.78□□□□□ -0.36
SIX6O95475 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SIX6O95475 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.78□□□□□ -0.36
SIX6O95475 PRYP6-201ENST00000514804 343 ntBASIC12.78□□□□□ -0.36
SIX6O95475 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
SIX6O95475 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.78□□□□□ -0.36
SIX6O95475 HNRNPUP1-201ENST00000554987 333 ntBASIC12.78□□□□□ -0.36
SIX6O95475 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.78□□□□□ -0.36
SIX6O95475 MIR3180-1-201ENST00000580374 94 ntBASIC12.78□□□□□ -0.36
SIX6O95475 MIR3180-3-201ENST00000584616 94 ntBASIC12.78□□□□□ -0.36
SIX6O95475 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 AC025062.2-201ENST00000605477 670 ntBASIC12.78□□□□□ -0.36
SIX6O95475 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 AL645728.2-201ENST00000641974 660 ntBASIC12.78□□□□□ -0.36
SIX6O95475 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.78□□□□□ -0.36
SIX6O95475 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SIX6O95475 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SIX6O95475 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms