Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 AL596276.2-201ENST00000447525 331 ntBASIC17.74■□□□□ 0.43
EFCC1Q9HA90 NUP210P1-202ENST00000504322 710 ntBASIC17.74■□□□□ 0.43
EFCC1Q9HA90 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
EFCC1Q9HA90 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 AC007274.2-201ENST00000421675 662 ntBASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 AC024681.1-201ENST00000521917 487 ntBASIC17.73■□□□□ 0.43
EFCC1Q9HA90 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 AC008132.1-202ENST00000342005 1389 ntBASIC17.73■□□□□ 0.43
EFCC1Q9HA90 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EFCC1Q9HA90 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 ACTBP8-201ENST00000403258 1108 ntBASIC17.72■□□□□ 0.43
EFCC1Q9HA90 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 AP000346.4-201ENST00000614827 381 ntBASIC17.72■□□□□ 0.43
EFCC1Q9HA90 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFCC1Q9HA90 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EFCC1Q9HA90 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EFCC1Q9HA90 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms