Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TMEM261P1-201ENST00000604899 340 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 WFDC1-204ENST00000613603 549 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AL033527.5-201ENST00000641382 801 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC007292.2-201ENST00000593524 1812 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC006486.2-201ENST00000624246 2199 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TOMM22P5-201ENST00000416399 439 ntBASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TTTY23B-201ENST00000442790 549 ntBASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC092552.1-201ENST00000547243 906 ntBASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 IGHV3-72-202ENST00000621503 303 ntBASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms