Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE9P-201ENST00000570642 692 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 U1.21-201ENST00000580816 167 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE10P-202ENST00000612005 668 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE8P-202ENST00000612377 668 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HPS1Q92902 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 C18orf15-201ENST00000623680 2534 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 AKAP8P1-201ENST00000434743 1349 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 AC008677.1-201ENST00000519230 1561 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 KRT8P39-201ENST00000396270 1433 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 AC073869.1-201ENST00000415574 2762 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 FAM8A3P-201ENST00000427218 844 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 TIMM8BP1-201ENST00000452384 211 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC015911.4-201ENST00000588022 1070 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 AC009093.7-201ENST00000623853 1223 ntBASIC14.1□□□□□ -0.15
HPS1Q92902 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
HPS1Q92902 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.1□□□□□ -0.15
HPS1Q92902 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HPS1Q92902 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms