Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEFF1Q8IYR6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.05■□□□□ 0
TMEFF1Q8IYR6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 CICP13-201ENST00000422015 2789 ntBASIC15.05■□□□□ 0
TMEFF1Q8IYR6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TMEFF1Q8IYR6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AC253536.4-201ENST00000440539 267 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 RN7SL163P-201ENST00000583100 276 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 BNIP3P13-201ENST00000599968 566 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AL603764.1-201ENST00000636452 321 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 FKBP4P6-201ENST00000457486 1332 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AC004899.1-201ENST00000424687 1714 ntBASIC15.05■□□□□ -0
TMEFF1Q8IYR6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEFF1Q8IYR6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.04■□□□□ -0
TMEFF1Q8IYR6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.04■□□□□ -0
TMEFF1Q8IYR6 PRKXP1-201ENST00000561423 1122 ntBASIC15.04■□□□□ -0
TMEFF1Q8IYR6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms