Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AC018442.1-201ENST00000421439 2061 ntBASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 ELK2BP-201ENST00000415014 1224 ntBASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 KRT18P34-201ENST00000488218 1270 ntBASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 RPS15P9-201ENST00000494093 319 ntBASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AP000867.3-201ENST00000524675 377 ntBASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CROCCP3Q8IVE0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AL589702.1-201ENST00000641229 1509 ntBASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AC023794.5-201ENST00000564380 2157 ntBASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AC138894.3-201ENST00000603787 634 ntBASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AP002761.4-201ENST00000565433 3361 ntBASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms