Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 BASP1P1-201ENST00000430708 665 ntBASIC15.9■□□□□ 0.14
RFX6Q8HWS3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX6Q8HWS3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AC036164.1-201ENST00000570544 333 ntBASIC15.89■□□□□ 0.13
RFX6Q8HWS3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AL391069.4-201ENST00000609583 481 ntBASIC15.89■□□□□ 0.13
RFX6Q8HWS3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX6Q8HWS3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 FAM86LP-201ENST00000478302 853 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 TPRX2P-201ENST00000535362 881 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 AC004790.1-201ENST00000612686 536 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.88■□□□□ 0.13
RFX6Q8HWS3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX6Q8HWS3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms