Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PAUPAR-201ENST00000630360 2965 ntBASIC12.46□□□□□ -0.41
CSMD2Q7Z408 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD2Q7Z408 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL590235.1-201ENST00000564650 861 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AC007326.1-201ENST00000604539 458 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CTBP2P8-201ENST00000422584 1330 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AC008536.3-201ENST00000623282 1599 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL137077.2-201ENST00000635124 1608 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AP000845.1-201ENST00000581677 2131 ntBASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CSMD2Q7Z408 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 AC108724.1-201ENST00000481669 352 ntBASIC12.44□□□□□ -0.42
CSMD2Q7Z408 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD2Q7Z408 LINC00528-201ENST00000600723 2160 ntBASIC12.44□□□□□ -0.42
CSMD2Q7Z408 AL596087.1-201ENST00000400979 1969 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms