Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 AL513523.2-202ENST00000427283 2040 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 CCL25-202ENST00000315626 450 ntTSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 KRT18P4-201ENST00000422599 1288 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 KRT8P30-201ENST00000432100 650 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 RHOQP2-201ENST00000449922 579 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 AC108724.1-201ENST00000481669 352 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.75■□□□□ 0.75
COL16A1Q07092 ALG1L7P-201ENST00000502317 768 ntBASIC19.75■□□□□ 0.75
COL16A1Q07092 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.75■□□□□ 0.75
COL16A1Q07092 PHF23-213ENST00000613632 850 ntTSL 5 BASIC19.75■□□□□ 0.75
COL16A1Q07092 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL16A1Q07092 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COL16A1Q07092 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL16A1Q07092 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL16A1Q07092 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 OR10N1P-201ENST00000392758 869 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.74■□□□□ 0.75
COL16A1Q07092 AC098657.1-201ENST00000416270 1135 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 PGAM1P11-201ENST00000416729 680 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.74■□□□□ 0.75
COL16A1Q07092 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 AC078814.4-201ENST00000546650 327 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.74■□□□□ 0.75
COL16A1Q07092 PSME2-217ENST00000615264 874 ntTSL 5 BASIC19.74■□□□□ 0.75
COL16A1Q07092 PSME2-218ENST00000630027 185 ntTSL 3 BASIC19.74■□□□□ 0.75
COL16A1Q07092 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.74■□□□□ 0.75
COL16A1Q07092 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.74■□□□□ 0.75
COL16A1Q07092 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.74■□□□□ 0.75
COL16A1Q07092 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.74■□□□□ 0.75
COL16A1Q07092 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.74■□□□□ 0.75
COL16A1Q07092 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL16A1Q07092 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL16A1Q07092 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL16A1Q07092 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.73■□□□□ 0.75
COL16A1Q07092 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.73■□□□□ 0.75
COL16A1Q07092 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.73■□□□□ 0.75
COL16A1Q07092 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.73■□□□□ 0.75
COL16A1Q07092 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AL121949.3-201ENST00000406684 385 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 CDCA4P4-201ENST00000435216 680 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.73■□□□□ 0.75
COL16A1Q07092 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL16A1Q07092 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC19.73■□□□□ 0.75
COL16A1Q07092 AC124068.2-201ENST00000569473 1109 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 AL133467.4-201ENST00000602953 725 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 AL591424.3-201ENST00000614278 872 ntBASIC19.73■□□□□ 0.75
COL16A1Q07092 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 364.8 ms