Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 AL161772.1-201ENST00000610494 4412 ntBASIC17.49■□□□□ 0.39
CHMP4BP1P59074 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP4BP1P59074 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 MIR648-201ENST00000385046 94 ntBASIC17.48■□□□□ 0.39
CHMP4BP1P59074 MIR1908-201ENST00000410394 80 ntBASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC136604.1-201ENST00000418535 575 ntBASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 RPL7P3-201ENST00000441388 714 ntBASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP4BP1P59074 AC023908.3-201ENST00000564211 3047 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 CICP13-201ENST00000422015 2789 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 TMBIM7P-203ENST00000641617 1718 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AC016694.1-201ENST00000434179 700 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 KRT18P43-201ENST00000469825 1281 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AP001063.1-201ENST00000568332 529 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AC010328.2-201ENST00000597698 1111 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AC097359.3-201ENST00000603982 1210 ntBASIC17.47■□□□□ 0.39
CHMP4BP1P59074 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHMP4BP1P59074 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP4BP1P59074 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP4BP1P59074 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP4BP1P59074 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP4BP1P59074 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms