Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.14■□□□□ 0.81
USP6P35125 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USP6P35125 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.14■□□□□ 0.81
USP6P35125 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.14■□□□□ 0.81
USP6P35125 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.14■□□□□ 0.81
USP6P35125 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.14■□□□□ 0.81
USP6P35125 RBM8B-201ENST00000555532 525 ntBASIC20.14■□□□□ 0.81
USP6P35125 PHBP15-201ENST00000574228 665 ntBASIC20.14■□□□□ 0.81
USP6P35125 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.14■□□□□ 0.81
USP6P35125 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.14■□□□□ 0.81
USP6P35125 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
USP6P35125 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
USP6P35125 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 KRT8P28-201ENST00000433288 1390 ntBASIC20.14■□□□□ 0.81
USP6P35125 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.14■□□□□ 0.81
USP6P35125 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.14■□□□□ 0.81
USP6P35125 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 SSR4P1-203ENST00000599569 2260 ntBASIC20.13■□□□□ 0.81
USP6P35125 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 RPSAP31-201ENST00000416648 895 ntBASIC20.13■□□□□ 0.81
USP6P35125 OR2R1P-201ENST00000441404 914 ntBASIC20.13■□□□□ 0.81
USP6P35125 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.13■□□□□ 0.81
USP6P35125 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.13■□□□□ 0.81
USP6P35125 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.13■□□□□ 0.81
USP6P35125 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.13■□□□□ 0.81
USP6P35125 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6P35125 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6P35125 COX6A1P2-201ENST00000620597 330 ntBASIC20.13■□□□□ 0.81
USP6P35125 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6P35125 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6P35125 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6P35125 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
USP6P35125 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.12■□□□□ 0.81
USP6P35125 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.12■□□□□ 0.81
USP6P35125 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 FAM90A2P-201ENST00000511144 1395 ntBASIC20.12■□□□□ 0.81
USP6P35125 FAM90A25P-201ENST00000528404 1395 ntBASIC20.12■□□□□ 0.81
USP6P35125 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.12■□□□□ 0.81
USP6P35125 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
USP6P35125 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
USP6P35125 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.12■□□□□ 0.81
USP6P35125 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6P35125 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.11■□□□□ 0.81
USP6P35125 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.11■□□□□ 0.81
USP6P35125 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.11■□□□□ 0.81
USP6P35125 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 RN7SL736P-201ENST00000613111 269 ntBASIC20.11■□□□□ 0.81
USP6P35125 AC092299.1-201ENST00000632679 757 ntBASIC20.11■□□□□ 0.81
USP6P35125 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms