Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 KRT18P9-201ENST00000604826 1300 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.54■□□□□ 0.56
TM4SF1P30408 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.54■□□□□ 0.56
TM4SF1P30408 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.54■□□□□ 0.56
TM4SF1P30408 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 KRT18P36-201ENST00000411618 1276 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 AC131206.1-201ENST00000538078 1211 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.54■□□□□ 0.56
TM4SF1P30408 AC092299.1-201ENST00000632679 757 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TM4SF1P30408 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.54■□□□□ 0.56
TM4SF1P30408 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.54■□□□□ 0.56
TM4SF1P30408 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TM4SF1P30408 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TM4SF1P30408 AL118508.1-201ENST00000613502 2345 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.53■□□□□ 0.56
TM4SF1P30408 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 MIR1227-201ENST00000408484 88 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.53■□□□□ 0.56
TM4SF1P30408 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF1P30408 MRPL22P1-201ENST00000505398 616 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.53■□□□□ 0.56
TM4SF1P30408 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TM4SF1P30408 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TM4SF1P30408 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TM4SF1P30408 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF1P30408 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.53■□□□□ 0.56
TM4SF1P30408 AC105137.3-201ENST00000617588 984 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TM4SF1P30408 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 AL391005.1-201ENST00000623953 2435 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 AC023090.2-201ENST00000625182 2110 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TM4SF1P30408 LTB4R2-202ENST00000528054 3092 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 ZBED1P1-201ENST00000502364 1930 ntBASIC18.53■□□□□ 0.56
TM4SF1P30408 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.52■□□□□ 0.56
TM4SF1P30408 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.52■□□□□ 0.56
TM4SF1P30408 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 AC018629.1-201ENST00000623381 1736 ntBASIC18.52■□□□□ 0.56
TM4SF1P30408 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
TM4SF1P30408 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.52■□□□□ 0.56
TM4SF1P30408 FTH1P22-201ENST00000456305 520 ntBASIC18.52■□□□□ 0.56
TM4SF1P30408 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.52■□□□□ 0.56
TM4SF1P30408 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AL157792.1-201ENST00000488281 530 ntBASIC18.52■□□□□ 0.56
TM4SF1P30408 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.52■□□□□ 0.56
TM4SF1P30408 AC027237.1-201ENST00000560942 655 ntBASIC18.52■□□□□ 0.56
TM4SF1P30408 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.52■□□□□ 0.56
TM4SF1P30408 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.52■□□□□ 0.56
TM4SF1P30408 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
TM4SF1P30408 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM4SF1P30408 TMBIM7P-202ENST00000641474 1516 ntBASIC18.52■□□□□ 0.56
TM4SF1P30408 SALL4P5-201ENST00000419001 1760 ntBASIC18.52■□□□□ 0.55
TM4SF1P30408 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.52■□□□□ 0.55
TM4SF1P30408 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF1P30408 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TM4SF1P30408 AL513523.2-202ENST00000427283 2040 ntBASIC18.52■□□□□ 0.55
TM4SF1P30408 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.52■□□□□ 0.55
TM4SF1P30408 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms