Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 AC093525.8-201ENST00000624099 1342 ntBASIC14.48□□□□□ -0.09
MMP11P24347 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.48□□□□□ -0.09
MMP11P24347 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 FO681548.1-201ENST00000455617 1132 ntBASIC14.48□□□□□ -0.09
MMP11P24347 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
MMP11P24347 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.48□□□□□ -0.09
MMP11P24347 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.48□□□□□ -0.09
MMP11P24347 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.48□□□□□ -0.09
MMP11P24347 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MMP11P24347 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MMP11P24347 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.47□□□□□ -0.09
MMP11P24347 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
MMP11P24347 BNIP3P42-201ENST00000454982 569 ntBASIC14.47□□□□□ -0.09
MMP11P24347 FTH1P14-201ENST00000482930 551 ntBASIC14.47□□□□□ -0.09
MMP11P24347 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.47□□□□□ -0.09
MMP11P24347 AC106760.1-201ENST00000508690 800 ntBASIC14.47□□□□□ -0.09
MMP11P24347 KRT18P25-201ENST00000508931 1278 ntBASIC14.47□□□□□ -0.09
MMP11P24347 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.47□□□□□ -0.09
MMP11P24347 BNIP3P29-201ENST00000598302 571 ntBASIC14.47□□□□□ -0.09
MMP11P24347 AC011447.5-201ENST00000616168 564 ntBASIC14.47□□□□□ -0.09
MMP11P24347 BX539320.1-201ENST00000623759 877 ntBASIC14.47□□□□□ -0.09
MMP11P24347 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 AL033527.4-201ENST00000641026 673 ntBASIC14.47□□□□□ -0.09
MMP11P24347 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MMP11P24347 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MMP11P24347 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.47□□□□□ -0.09
MMP11P24347 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MMP11P24347 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.46□□□□□ -0.09
MMP11P24347 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.46□□□□□ -0.09
MMP11P24347 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MMP11P24347 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
MMP11P24347 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MMP11P24347 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
MMP11P24347 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
MMP11P24347 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms