Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-7■□□□□ 9.1
RPS3P23396 MTHFD1-203ENST00000553391 568 ntTSL 49.34□□□□□ -0.914e-6■□□□□ 9.1
RPS3P23396 SAFB-206ENST00000589006 459 ntTSL 519.41■□□□□ 0.71e-7■□□□□ 9.1
RPS3P23396 LAMA5-202ENST00000370677 1674 ntTSL 219.74■□□□□ 0.754e-10■□□□□ 9.1
RPS3P23396 SEC31A-230ENST00000510167 857 ntTSL 48.21□□□□□ -1.13e-6■□□□□ 9.1
RPS3P23396 SEC31A-224ENST00000507828 1329 ntTSL 54.96□□□□□ -1.622e-7■□□□□ 9.1
RPS3P23396 SEC31A-234ENST00000512664 710 ntTSL 32.21□□□□□ -2.063e-6■□□□□ 9.1
RPS3P23396 NCL-202ENST00000356936 890 ntTSL 316.68■□□□□ 0.261e-23■□□□□ 9.1
RPS3P23396 TMBIM1-205ENST00000420341 361 ntTSL 415.06■□□□□ 02e-11■□□□□ 9.1
RPS3P23396 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.273e-6■□□□□ 9.1
RPS3P23396 FERMT3-209ENST00000546255 564 ntTSL 314.84□□□□□ -0.036e-15■□□□□ 9.1
RPS3P23396 TMEM214-211ENST00000475258 927 ntTSL 212.58□□□□□ -0.46e-15■□□□□ 9.1
RPS3P23396 TMEM214-209ENST00000460904 506 ntTSL 310.4□□□□□ -0.746e-15■□□□□ 9.1
RPS3P23396 TMEM214-204ENST00000425720 740 ntTSL 59.28□□□□□ -0.926e-15■□□□□ 9.1
RPS3P23396 DNAJA2-201ENST00000317089 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.723e-10■□□□□ 9
RPS3P23396 DNAJA2-202ENST00000563158 1825 ntTSL 510.21□□□□□ -0.783e-10■□□□□ 9
RPS3P23396 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.86■■■□□ 2.214e-6■□□□□ 9
RPS3P23396 RPS2-211ENST00000531065 1548 ntTSL 526.6■■□□□ 1.854e-6■□□□□ 9
RPS3P23396 RPS2-206ENST00000527302 719 ntTSL 325.13■■□□□ 1.614e-6■□□□□ 9
RPS3P23396 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.9■■□□□ 1.584e-6■□□□□ 9
RPS3P23396 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.514e-6■□□□□ 9
RPS3P23396 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.45■■□□□ 1.54e-6■□□□□ 9
RPS3P23396 RPS2-205ENST00000527109 1030 ntTSL 1 (best)24.45■■□□□ 1.54e-6■□□□□ 9
RPS3P23396 RPS2-215ENST00000533872 1114 ntTSL 524.12■■□□□ 1.454e-6■□□□□ 9
RPS3P23396 RPS2-208ENST00000527871 1243 ntTSL 1 (best)23.33■■□□□ 1.334e-6■□□□□ 9
RPS3P23396 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.67■■□□□ 1.223e-9■□□□□ 9
RPS3P23396 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.47■■□□□ 1.194e-15■□□□□ 9
RPS3P23396 COL9A2-201ENST00000372736 319 ntTSL 322.01■■□□□ 1.114e-6■□□□□ 9
RPS3P23396 NEU4-215ENST00000488997 541 ntTSL 421.49■■□□□ 1.035e-8■□□□□ 9
RPS3P23396 COL9A2-203ENST00000417105 677 ntTSL 521.26■□□□□ 0.994e-6■□□□□ 9
RPS3P23396 NEU4-212ENST00000435894 484 ntTSL 420.97■□□□□ 0.955e-8■□□□□ 9
RPS3P23396 SCO1-204ENST00000579396 563 ntTSL 220.66■□□□□ 0.94e-6■□□□□ 9
RPS3P23396 SELENOS-202ENST00000526043 2444 ntTSL 220.6■□□□□ 0.894e-6■□□□□ 9
RPS3P23396 COL9A2-211ENST00000496215 668 ntTSL 520.04■□□□□ 0.84e-6■□□□□ 9
RPS3P23396 TNFRSF10B-204ENST00000519028 612 ntTSL 219.99■□□□□ 0.794e-10■□□□□ 9
RPS3P23396 SELENOS-205ENST00000528346 655 ntTSL 319.88■□□□□ 0.774e-6■□□□□ 9
RPS3P23396 RPS2-204ENST00000526908 638 ntTSL 219.55■□□□□ 0.724e-6■□□□□ 9
RPS3P23396 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.48■□□□□ 0.715e-8■□□□□ 9
RPS3P23396 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.47■□□□□ 0.714e-6■□□□□ 9
RPS3P23396 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.4■□□□□ 0.74e-6■□□□□ 9
RPS3P23396 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.684e-6■□□□□ 9
RPS3P23396 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.685e-8■□□□□ 9
RPS3P23396 SCO1-202ENST00000577335 571 ntTSL 319.18■□□□□ 0.664e-6■□□□□ 9
RPS3P23396 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19■□□□□ 0.635e-8■□□□□ 9
RPS3P23396 COL9A3-210ENST00000472880 959 ntTSL 318.94■□□□□ 0.622e-23■□□□□ 9
RPS3P23396 NEU4-207ENST00000420288 845 ntTSL 318.58■□□□□ 0.565e-8■□□□□ 9
RPS3P23396 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.3■□□□□ 0.524e-6■□□□□ 9
RPS3P23396 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.424e-6■□□□□ 9
RPS3P23396 RPS2-216ENST00000534461 734 ntTSL 217.57■□□□□ 0.44e-6■□□□□ 9
RPS3P23396 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.384e-6■□□□□ 9
RPS3P23396 THOP1-211ENST00000590970 1104 ntTSL 317.43■□□□□ 0.384e-6■□□□□ 9
RPS3P23396 THOP1-209ENST00000589087 2977 ntTSL 217.19■□□□□ 0.344e-6■□□□□ 9
RPS3P23396 WFS1-206ENST00000513395 570 ntTSL 217.12■□□□□ 0.333e-9■□□□□ 9
RPS3P23396 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.294e-6■□□□□ 9
RPS3P23396 LAMB2-217ENST00000498377 1021 ntTSL 216.63■□□□□ 0.259e-13■□□□□ 9
RPS3P23396 NEU4-210ENST00000428592 505 ntTSL 416.32■□□□□ 0.25e-8■□□□□ 9
RPS3P23396 THOP1-213ENST00000591363 639 ntTSL 516.02■□□□□ 0.164e-6■□□□□ 9
RPS3P23396 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.084e-6■□□□□ 9
RPS3P23396 NEU4-209ENST00000426032 676 ntTSL 315.34■□□□□ 0.055e-8■□□□□ 9
RPS3P23396 FGFR3-206ENST00000469068 821 ntTSL 315.14■□□□□ 0.019e-13■□□□□ 9
RPS3P23396 PCSK6-210ENST00000559499 3325 ntTSL 215.09■□□□□ 0.014e-6■□□□□ 9
RPS3P23396 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -04e-6■□□□□ 9
RPS3P23396 TBX3-204ENST00000552054 1814 ntTSL 215□□□□□ -0.014e-6■□□□□ 9
RPS3P23396 TNFRSF10B-203ENST00000518531 564 ntTSL 314.78□□□□□ -0.049e-13■□□□□ 9
RPS3P23396 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.054e-6■□□□□ 9
RPS3P23396 SLC26A6-208ENST00000421649 910 ntTSL 314.71□□□□□ -0.055e-8■□□□□ 9
RPS3P23396 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.084e-6■□□□□ 9
RPS3P23396 AKAP1-218ENST00000576591 565 ntTSL 414.48□□□□□ -0.095e-8■□□□□ 9
RPS3P23396 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.124e-6■□□□□ 9
RPS3P23396 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.164e-6■□□□□ 9
RPS3P23396 COL9A2-208ENST00000488463 1005 ntTSL 513.82□□□□□ -0.24e-6■□□□□ 9
RPS3P23396 SLC38A10-208ENST00000543204 663 ntTSL 213.72□□□□□ -0.215e-8■□□□□ 9
RPS3P23396 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.224e-6■□□□□ 9
RPS3P23396 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.264e-6■□□□□ 9
RPS3P23396 TNFRSF10B-205ENST00000519910 546 ntTSL 413.32□□□□□ -0.289e-13■□□□□ 9
RPS3P23396 LAMB2-205ENST00000467506 689 ntTSL 213.08□□□□□ -0.329e-13■□□□□ 9
RPS3P23396 PCSK6-209ENST00000559430 338 ntTSL 312.9□□□□□ -0.344e-6■□□□□ 9
RPS3P23396 PCSK6-205ENST00000558433 543 ntTSL 412.66□□□□□ -0.384e-6■□□□□ 9
RPS3P23396 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.434e-6■□□□□ 9
RPS3P23396 SLC38A10-209ENST00000546352 580 ntTSL 512.33□□□□□ -0.445e-8■□□□□ 9
RPS3P23396 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.474e-6■□□□□ 9
RPS3P23396 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC12.07□□□□□ -0.484e-6■□□□□ 9
RPS3P23396 PTPRF-211ENST00000467464 571 ntTSL 311.53□□□□□ -0.564e-6■□□□□ 9
RPS3P23396 SLC26A6-210ENST00000431213 556 ntTSL 411.09□□□□□ -0.635e-8■□□□□ 9
RPS3P23396 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.664e-6■□□□□ 9
RPS3P23396 TM9SF4-203ENST00000417389 553 ntTSL 410.75□□□□□ -0.693e-9■□□□□ 9
RPS3P23396 AGPAT1-208ENST00000490711 2448 ntTSL 29.62□□□□□ -0.874e-6■□□□□ 9
RPS3P23396 RPS2-203ENST00000526586 878 ntTSL 28.86□□□□□ -0.994e-6■□□□□ 9
RPS3P23396 RPS2-212ENST00000532746 931 ntTSL 38.53□□□□□ -1.044e-6■□□□□ 9
RPS3P23396 RPS2-214ENST00000533186 625 ntTSL 38.53□□□□□ -1.044e-6■□□□□ 9
RPS3P23396 PTPRF-210ENST00000463041 298 ntTSL 37.03□□□□□ -1.284e-6■□□□□ 9
RPS3P23396 PCSK6-206ENST00000558864 3868 ntTSL 26.5□□□□□ -1.374e-6■□□□□ 9
RPS3P23396 SCO1-205ENST00000582053 565 ntTSL 45.94□□□□□ -1.464e-6■□□□□ 9
RPS3P23396 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.573e-9■□□□□ 9
RPS3P23396 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.01□□□□□ -1.939e-13■□□□□ 9
RPS3P23396 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.959e-13■□□□□ 9
RPS3P23396 ARL6IP6-203ENST00000455875 479 ntTSL 20.66□□□□□ -2.32e-10■□□□□ 9
RPS3P23396 YIPF4-204ENST00000495355 544 ntTSL 217.32■□□□□ 0.367e-15■□□□□ 9
RPS3P23396 SLC5A6-215ENST00000476319 842 ntTSL 314.58□□□□□ -0.087e-7■□□□□ 9
RPS3P23396 CTSA-215ENST00000607187 509 ntTSL 29.69□□□□□ -0.865e-10■□□□□ 9
Retrieved 100 of 24,271 protein–RNA pairs in 757.8 ms