RNA–Protein interactions for RNA: ENST00000559499.1

PCSK6-210, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 3,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-210ENST00000559499 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
PCSK6-210ENST00000559499 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.15
PCSK6-210ENST00000559499 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.14
PCSK6-210ENST00000559499 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
PCSK6-210ENST00000559499 SUPT5HO00267 1087 aaKnown RBP27.61■■■□□ 2.01
PCSK6-210ENST00000559499 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
PCSK6-210ENST00000559499 ABCC9O60706 1549 aa27.08■■□□□ 1.93
PCSK6-210ENST00000559499 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
PCSK6-210ENST00000559499 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
PCSK6-210ENST00000559499 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
PCSK6-210ENST00000559499 NACADO15069 1562 aa26.07■■□□□ 1.76
PCSK6-210ENST00000559499 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
PCSK6-210ENST00000559499 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
PCSK6-210ENST00000559499 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
PCSK6-210ENST00000559499 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
PCSK6-210ENST00000559499 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
PCSK6-210ENST00000559499 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.72
PCSK6-210ENST00000559499 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
PCSK6-210ENST00000559499 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
PCSK6-210ENST00000559499 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
PCSK6-210ENST00000559499 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
PCSK6-210ENST00000559499 WIZO95785 1651 aa25.46■■□□□ 1.67
PCSK6-210ENST00000559499 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
PCSK6-210ENST00000559499 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
PCSK6-210ENST00000559499 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.62
PCSK6-210ENST00000559499 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
PCSK6-210ENST00000559499 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
PCSK6-210ENST00000559499 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
PCSK6-210ENST00000559499 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
PCSK6-210ENST00000559499 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
PCSK6-210ENST00000559499 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
PCSK6-210ENST00000559499 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
PCSK6-210ENST00000559499 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
PCSK6-210ENST00000559499 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
PCSK6-210ENST00000559499 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
PCSK6-210ENST00000559499 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
PCSK6-210ENST00000559499 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
PCSK6-210ENST00000559499 SOGA1O94964 1423 aa24.55■■□□□ 1.52
PCSK6-210ENST00000559499 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
PCSK6-210ENST00000559499 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
PCSK6-210ENST00000559499 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
PCSK6-210ENST00000559499 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-210ENST00000559499 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.5
PCSK6-210ENST00000559499 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
PCSK6-210ENST00000559499 HRCP23327 699 aa24.3■■□□□ 1.48
PCSK6-210ENST00000559499 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
PCSK6-210ENST00000559499 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
PCSK6-210ENST00000559499 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
PCSK6-210ENST00000559499 CEP162Q5TB80 1403 aa24.08■■□□□ 1.45
PCSK6-210ENST00000559499 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
PCSK6-210ENST00000559499 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
PCSK6-210ENST00000559499 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
PCSK6-210ENST00000559499 EEA1Q15075 1411 aa23.94■■□□□ 1.42
PCSK6-210ENST00000559499 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
PCSK6-210ENST00000559499 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
PCSK6-210ENST00000559499 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
PCSK6-210ENST00000559499 CFTRP13569 1480 aa23.91■■□□□ 1.42
PCSK6-210ENST00000559499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
PCSK6-210ENST00000559499 NESP48681 1621 aa23.87■■□□□ 1.41
PCSK6-210ENST00000559499 CUX1P39880 1505 aa23.87■■□□□ 1.41
PCSK6-210ENST00000559499 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
PCSK6-210ENST00000559499 APLP2Q06481 763 aa23.82■■□□□ 1.4
PCSK6-210ENST00000559499 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PCSK6-210ENST00000559499 CLIP1P30622 1438 aa23.8■■□□□ 1.4
PCSK6-210ENST00000559499 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
PCSK6-210ENST00000559499 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
PCSK6-210ENST00000559499 CUX2O14529 1486 aa23.72■■□□□ 1.39
PCSK6-210ENST00000559499 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
PCSK6-210ENST00000559499 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
PCSK6-210ENST00000559499 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
PCSK6-210ENST00000559499 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
PCSK6-210ENST00000559499 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
PCSK6-210ENST00000559499 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
PCSK6-210ENST00000559499 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
PCSK6-210ENST00000559499 KIF21BO75037 1637 aa23.57■■□□□ 1.36
PCSK6-210ENST00000559499 IGF1RP08069 1367 aa23.53■■□□□ 1.36
PCSK6-210ENST00000559499 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
PCSK6-210ENST00000559499 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
PCSK6-210ENST00000559499 ITGAEP38570 1179 aa23.5■■□□□ 1.35
PCSK6-210ENST00000559499 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
PCSK6-210ENST00000559499 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
PCSK6-210ENST00000559499 KANK4Q5T7N3 995 aaPredicted RBP23.46■■□□□ 1.35
PCSK6-210ENST00000559499 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
PCSK6-210ENST00000559499 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
PCSK6-210ENST00000559499 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
PCSK6-210ENST00000559499 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
PCSK6-210ENST00000559499 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
PCSK6-210ENST00000559499 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
PCSK6-210ENST00000559499 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
PCSK6-210ENST00000559499 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
PCSK6-210ENST00000559499 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
PCSK6-210ENST00000559499 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
PCSK6-210ENST00000559499 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
PCSK6-210ENST00000559499 LAMC3Q9Y6N6 1575 aa23.22■■□□□ 1.31
PCSK6-210ENST00000559499 FBLN2P98095 1184 aa23.18■■□□□ 1.3
PCSK6-210ENST00000559499 FHOD3Q2V2M9 1422 aa23.18■■□□□ 1.3
PCSK6-210ENST00000559499 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.34e-7■□□□□ 9.4
PCSK6-210ENST00000559499 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
PCSK6-210ENST00000559499 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
PCSK6-210ENST00000559499 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms