RNA–Protein interactions for RNA: ENST00000389286.8

PRTG-201, Transcript of protogenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRTG, Length 11,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTG-201ENST00000389286 NISCHQ9Y2I1 1504 aa9.98□□□□□ -0.81
PRTG-201ENST00000389286 DCAF8L2P0C7V8 631 aa8.79□□□□□ -1
PRTG-201ENST00000389286 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
PRTG-201ENST00000389286 SHROOM4Q9ULL8 1493 aa8.69□□□□□ -1.02
PRTG-201ENST00000389286 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
PRTG-201ENST00000389286 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
PRTG-201ENST00000389286 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.06
PRTG-201ENST00000389286 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
PRTG-201ENST00000389286 HRCP23327 699 aa8.31□□□□□ -1.08
PRTG-201ENST00000389286 CHIC1Q5VXU3 224 aa8.28□□□□□ -1.08
PRTG-201ENST00000389286 TRIM41Q8WV44 630 aa8.28□□□□□ -1.08
PRTG-201ENST00000389286 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
PRTG-201ENST00000389286 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
PRTG-201ENST00000389286 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
PRTG-201ENST00000389286 APLP2Q06481 763 aa8.17□□□□□ -1.1
PRTG-201ENST00000389286 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
PRTG-201ENST00000389286 MYT1Q01538 1121 aa8.12□□□□□ -1.11
PRTG-201ENST00000389286 FAM9AQ8IZU1 332 aaPredicted RBP8.1□□□□□ -1.11
PRTG-201ENST00000389286 CCER1Q8TC90 406 aaPredicted RBP8.09□□□□□ -1.11
PRTG-201ENST00000389286 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
PRTG-201ENST00000389286 EHMT2Q96KQ7 1210 aa8□□□□□ -1.13
PRTG-201ENST00000389286 SCRIBQ14160 1630 aa8□□□□□ -1.13
PRTG-201ENST00000389286 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
PRTG-201ENST00000389286 NACADO15069 1562 aa7.98□□□□□ -1.13
PRTG-201ENST00000389286 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
PRTG-201ENST00000389286 ABCC9O60706 1549 aa7.97□□□□□ -1.13
PRTG-201ENST00000389286 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
PRTG-201ENST00000389286 RSF1Q96T23 1441 aaPredicted RBP7.88□□□□□ -1.15
PRTG-201ENST00000389286 PPARGC1BQ86YN6 1023 aaKnown RBP7.87□□□□□ -1.15
PRTG-201ENST00000389286 EEA1Q15075 1411 aa7.85□□□□□ -1.15
PRTG-201ENST00000389286 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
PRTG-201ENST00000389286 BAZ1AQ9NRL2 1556 aaPredicted RBP7.83□□□□□ -1.16
PRTG-201ENST00000389286 TTBK1Q5TCY1 1321 aaPredicted RBP7.81□□□□□ -1.16
PRTG-201ENST00000389286 CLSPNQ9HAW4 1339 aa7.79□□□□□ -1.16
PRTG-201ENST00000389286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.77□□□□□ -1.17
PRTG-201ENST00000389286 CSRNP3Q8WYN3 585 aa7.76□□□□□ -1.17
PRTG-201ENST00000389286 NEFLP07196 543 aa7.75□□□□□ -1.17
PRTG-201ENST00000389286 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
PRTG-201ENST00000389286 GOLGA3Q08378 1498 aa7.71□□□□□ -1.17
PRTG-201ENST00000389286 ACIN1Q9UKV3 1341 aaKnown RBP7.71□□□□□ -1.17
PRTG-201ENST00000389286 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
PRTG-201ENST00000389286 RANGAP1P46060 587 aaPredicted RBP7.69□□□□□ -1.18
PRTG-201ENST00000389286 TNIKQ9UKE5 1360 aa7.69□□□□□ -1.18
PRTG-201ENST00000389286 HNRNPUL2Q1KMD3 747 aaKnown RBP7.68□□□□□ -1.18
PRTG-201ENST00000389286 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
PRTG-201ENST00000389286 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
PRTG-201ENST00000389286 TOP2AP11388 1531 aaKnown RBP7.66□□□□□ -1.18
PRTG-201ENST00000389286 WIZO95785 1651 aa7.65□□□□□ -1.19
PRTG-201ENST00000389286 MROH2BQ7Z745 1585 aa7.65□□□□□ -1.19
PRTG-201ENST00000389286 GTF3C3Q9Y5Q9 886 aa7.64□□□□□ -1.19
PRTG-201ENST00000389286 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
PRTG-201ENST00000389286 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
PRTG-201ENST00000389286 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
PRTG-201ENST00000389286 CLIP1P30622 1438 aa7.62□□□□□ -1.19
PRTG-201ENST00000389286 CECR2Q9BXF3 1484 aa7.61□□□□□ -1.19
PRTG-201ENST00000389286 SMARCA4P51532 1647 aa7.61□□□□□ -1.19
PRTG-201ENST00000389286 SMARCA2P51531 1590 aa7.59□□□□□ -1.19
PRTG-201ENST00000389286 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
PRTG-201ENST00000389286 PABPN1Q86U42 306 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRTG-201ENST00000389286 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
PRTG-201ENST00000389286 ITGAEP38570 1179 aa7.54□□□□□ -1.2
PRTG-201ENST00000389286 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
PRTG-201ENST00000389286 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
PRTG-201ENST00000389286 ANP32CO43423 234 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 ABCC8Q09428 1581 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 NEUROD1Q13562 356 aa7.51□□□□□ -1.21
PRTG-201ENST00000389286 FAM50AQ14320 339 aaKnown RBP7.5□□□□□ -1.21
PRTG-201ENST00000389286 KIF21BO75037 1637 aa7.48□□□□□ -1.21
PRTG-201ENST00000389286 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
PRTG-201ENST00000389286 TIMELESSQ9UNS1 1208 aa7.47□□□□□ -1.21
PRTG-201ENST00000389286 SOGA1O94964 1423 aa7.46□□□□□ -1.21
PRTG-201ENST00000389286 TONSLQ96HA7 1378 aa7.44□□□□□ -1.22
PRTG-201ENST00000389286 MYT1LQ9UL68 1186 aa7.43□□□□□ -1.22
PRTG-201ENST00000389286 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
PRTG-201ENST00000389286 CCNB3Q8WWL7 1395 aa7.42□□□□□ -1.22
PRTG-201ENST00000389286 MIER1Q8N108 512 aa7.41□□□□□ -1.22
PRTG-201ENST00000389286 ERICH3Q5RHP9 1530 aa7.41□□□□□ -1.22
PRTG-201ENST00000389286 UNC13AQ9UPW8 1703 aa7.39□□□□□ -1.23
PRTG-201ENST00000389286 TRIM52Q96A61 297 aa7.38□□□□□ -1.23
PRTG-201ENST00000389286 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 MTUS2Q5JR59 1369 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 DAXXQ9UER7 740 aaPredicted RBP7.36□□□□□ -1.23
PRTG-201ENST00000389286 RAPGEF2Q9Y4G8 1499 aa7.35□□□□□ -1.23
PRTG-201ENST00000389286 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PRTG-201ENST00000389286 RTL5Q5HYW3 569 aaPredicted RBP7.35□□□□□ -1.23
PRTG-201ENST00000389286 SETD5Q9C0A6 1442 aa7.33□□□□□ -1.24
PRTG-201ENST00000389286 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
PRTG-201ENST00000389286 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
PRTG-201ENST00000389286 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
PRTG-201ENST00000389286 FKBP8Q14318 412 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 CUX2O14529 1486 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 EIF4G1Q04637 1599 aaKnown RBP7.31□□□□□ -1.24
PRTG-201ENST00000389286 DDX10Q13206 875 aaKnown RBP7.31□□□□□ -1.24
PRTG-201ENST00000389286 CARMIL1Q5VZK9 1371 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 SYNJ1O43426 1573 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 HMGXB3Q12766 1538 aa7.3□□□□□ -1.24
PRTG-201ENST00000389286 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.24
PRTG-201ENST00000389286 ERICH6BQ5W0A0 696 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms