RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
SCO1-204ENST00000579396 CCDC180Q9P1Z9 1646 aa44.34■■■■■ 4.69
SCO1-204ENST00000579396 ABCC9O60706 1549 aa43.14■■■■■ 4.5
SCO1-204ENST00000579396 DCAF8L2P0C7V8 631 aa41.96■■■■■ 4.31
SCO1-204ENST00000579396 ZCCHC6Q5VYS8 1495 aaKnown RBP41.79■■■■■ 4.28
SCO1-204ENST00000579396 NACADO15069 1562 aa41.71■■■■■ 4.27
SCO1-204ENST00000579396 RB1CC1Q8TDY2 1594 aa41.66■■■■■ 4.26
SCO1-204ENST00000579396 MYO15BQ96JP2 1530 aa41.6■■■■■ 4.25
SCO1-204ENST00000579396 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
SCO1-204ENST00000579396 UNC13AQ9UPW8 1703 aa40.53■■■■■ 4.08
SCO1-204ENST00000579396 SCRIBQ14160 1630 aa40.48■■■■■ 4.07
SCO1-204ENST00000579396 PABPN1Q86U42 306 aaKnown RBP eCLIP40.47■■■■■ 4.07
SCO1-204ENST00000579396 BICRAQ9NZM4 1560 aa40.3■■■■■ 4.04
SCO1-204ENST00000579396 SHROOM4Q9ULL8 1493 aa40.01■■■■■ 4
SCO1-204ENST00000579396 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
SCO1-204ENST00000579396 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
SCO1-204ENST00000579396 CECR2Q9BXF3 1484 aa39.01■■■■□ 3.84
SCO1-204ENST00000579396 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
SCO1-204ENST00000579396 BAZ1AQ9NRL2 1556 aaPredicted RBP38.85■■■■□ 3.81
SCO1-204ENST00000579396 SMARCA4P51532 1647 aa38.77■■■■□ 3.8
SCO1-204ENST00000579396 MROH2BQ7Z745 1585 aa38.62■■■■□ 3.77
SCO1-204ENST00000579396 ATAD2BQ9ULI0 1458 aa38.57■■■■□ 3.76
SCO1-204ENST00000579396 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
SCO1-204ENST00000579396 SMARCA2P51531 1590 aa38.53■■■■□ 3.76
SCO1-204ENST00000579396 PEG3Q9GZU2 1588 aa38.41■■■■□ 3.74
SCO1-204ENST00000579396 RSF1Q96T23 1441 aaPredicted RBP38.37■■■■□ 3.73
SCO1-204ENST00000579396 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
SCO1-204ENST00000579396 BAZ1BQ9UIG0 1483 aaKnown RBP38.26■■■■□ 3.72
SCO1-204ENST00000579396 WIZO95785 1651 aa38.17■■■■□ 3.7
SCO1-204ENST00000579396 TOP2AP11388 1531 aaKnown RBP37.83■■■■□ 3.65
SCO1-204ENST00000579396 SUPT5HO00267 1087 aaKnown RBP37.76■■■■□ 3.64
SCO1-204ENST00000579396 CADPSQ9ULU8 1353 aa37.46■■■■□ 3.59
SCO1-204ENST00000579396 CCDC88BA6NC98 1476 aa37.45■■■■□ 3.59
SCO1-204ENST00000579396 NESP48681 1621 aa37.39■■■■□ 3.58
SCO1-204ENST00000579396 LAMC3Q9Y6N6 1575 aa37.39■■■■□ 3.58
SCO1-204ENST00000579396 PDS5BQ9NTI5 1447 aa37.25■■■■□ 3.55
SCO1-204ENST00000579396 CFTRP13569 1480 aa37.25■■■■□ 3.55
SCO1-204ENST00000579396 ERCC6Q03468 1493 aa37.21■■■■□ 3.55
SCO1-204ENST00000579396 FANCD2Q9BXW9 1451 aa36.96■■■■□ 3.51
SCO1-204ENST00000579396 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
SCO1-204ENST00000579396 KIF21AQ7Z4S6 1674 aa36.86■■■■□ 3.49
SCO1-204ENST00000579396 CUX2O14529 1486 aa36.86■■■■□ 3.49
SCO1-204ENST00000579396 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
SCO1-204ENST00000579396 MRC2Q9UBG0 1479 aa36.74■■■■□ 3.47
SCO1-204ENST00000579396 THOC2Q8NI27 1593 aaKnown RBP36.68■■■■□ 3.46
SCO1-204ENST00000579396 DNAJC5Q9H3Z4 198 aa36.64■■■■□ 3.46
SCO1-204ENST00000579396 WDR62O43379 1518 aa36.56■■■■□ 3.44
SCO1-204ENST00000579396 URB2Q14146 1524 aaKnown RBP36.52■■■■□ 3.44
SCO1-204ENST00000579396 ABCC8Q09428 1581 aa36.52■■■■□ 3.44
SCO1-204ENST00000579396 TOPBP1Q92547 1522 aa36.39■■■■□ 3.42
SCO1-204ENST00000579396 DNMBPQ6XZF7 1577 aa36.34■■■■□ 3.41
SCO1-204ENST00000579396 CUX1P39880 1505 aa36.2■■■■□ 3.39
SCO1-204ENST00000579396 WRNQ14191 1432 aaPredicted RBP eCLIP36.18■■■■□ 3.38
SCO1-204ENST00000579396 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
SCO1-204ENST00000579396 POLA1P09884 1462 aaPredicted RBP36.09■■■■□ 3.37
SCO1-204ENST00000579396 SOGA1O94964 1423 aa36.06■■■■□ 3.36
SCO1-204ENST00000579396 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
SCO1-204ENST00000579396 TOP2BQ02880 1626 aa35.98■■■■□ 3.35
SCO1-204ENST00000579396 RAD54L2Q9Y4B4 1467 aa35.94■■■■□ 3.34
SCO1-204ENST00000579396 SYNJ1O43426 1573 aa35.93■■■■□ 3.34
SCO1-204ENST00000579396 BIVM-ERCC5R4GMW8 1640 aa35.93■■■■□ 3.34
SCO1-204ENST00000579396 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
SCO1-204ENST00000579396 ZNF608Q9ULD9 1512 aaPredicted RBP35.86■■■■□ 3.33
SCO1-204ENST00000579396 TDRD9Q8NDG6 1382 aaKnown RBP35.78■■■■□ 3.32
SCO1-204ENST00000579396 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.321e-7■■■■■ 39.7
SCO1-204ENST00000579396 ABCA10Q8WWZ4 1543 aa35.76■■■■□ 3.31
SCO1-204ENST00000579396 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
SCO1-204ENST00000579396 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
SCO1-204ENST00000579396 EIF4G3O43432 1585 aaKnown RBP35.65■■■■□ 3.3
SCO1-204ENST00000579396 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
SCO1-204ENST00000579396 GRIN2BQ13224 1484 aa35.55■■■■□ 3.28
SCO1-204ENST00000579396 ABCA5Q8WWZ7 1642 aa35.47■■■■□ 3.27
SCO1-204ENST00000579396 KIF27Q86VH2 1401 aa35.44■■■■□ 3.26
SCO1-204ENST00000579396 CHIC1Q5VXU3 224 aa35.44■■■■□ 3.26
SCO1-204ENST00000579396 MAGI1Q96QZ7 1491 aaPredicted RBP35.4■■■■□ 3.26
SCO1-204ENST00000579396 OSCARQ8IYS5 282 aa35.39■■■■□ 3.26
SCO1-204ENST00000579396 SNAPC4Q5SXM2 1469 aa35.39■■■■□ 3.26
SCO1-204ENST00000579396 FBLN2P98095 1184 aa35.38■■■■□ 3.25
SCO1-204ENST00000579396 CHMP7Q8WUX9 453 aaPredicted RBP35.36■■■■□ 3.25
SCO1-204ENST00000579396 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.25
SCO1-204ENST00000579396 PBRM1Q86U86 1689 aa35.32■■■■□ 3.24
SCO1-204ENST00000579396 IGF1RP08069 1367 aa35.27■■■■□ 3.24
SCO1-204ENST00000579396 SYNJ2O15056 1496 aa35.25■■■■□ 3.23
SCO1-204ENST00000579396 FHAD1B1AJZ9 1412 aa35.23■■■■□ 3.23
SCO1-204ENST00000579396 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
SCO1-204ENST00000579396 ADAMTS12P58397 1594 aa35.11■■■■□ 3.21
SCO1-204ENST00000579396 CHD1O14646 1710 aa35.11■■■■□ 3.21
SCO1-204ENST00000579396 CARMIL1Q5VZK9 1371 aa35.08■■■■□ 3.21
SCO1-204ENST00000579396 GRIN2AQ12879 1464 aa35.04■■■■□ 3.2
SCO1-204ENST00000579396 CUL7Q14999 1698 aa35.01■■■■□ 3.2
SCO1-204ENST00000579396 EEA1Q15075 1411 aa35.01■■■■□ 3.2
SCO1-204ENST00000579396 CSRNP3Q8WYN3 585 aa34.99■■■■□ 3.19
SCO1-204ENST00000579396 NUP160Q12769 1436 aa34.89■■■■□ 3.18
SCO1-204ENST00000579396 FAM9AQ8IZU1 332 aaPredicted RBP34.88■■■■□ 3.17
SCO1-204ENST00000579396 RAPGEF2Q9Y4G8 1499 aa34.86■■■■□ 3.17
SCO1-204ENST00000579396 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
SCO1-204ENST00000579396 PRXQ9BXM0 1461 aa34.79■■■■□ 3.16
SCO1-204ENST00000579396 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
SCO1-204ENST00000579396 JPH4Q96JJ6 628 aa34.7■■■■□ 3.15
SCO1-204ENST00000579396 KIAA0586Q9BVV6 1533 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms