Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SAMD11P1-201ENST00000571429 661 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AC244093.1-201ENST00000610837 814 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ENPP7P14-201ENST00000621765 1040 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AL158070.2-201ENST00000623713 1621 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC006033.1-201ENST00000440505 426 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 HOMER2P2-201ENST00000451621 847 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 EEF1DP1-201ENST00000585891 896 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC023157.3-201ENST00000619086 2088 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AL354989.2-201ENST00000435838 1540 ntBASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40ALP0C0E4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 MIR1247-201ENST00000408206 136 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 GPAA1P2-201ENST00000417923 928 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC022616.1-201ENST00000518688 554 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms