Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 AC002056.1-201ENST00000395613 760 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 RPS8P6-201ENST00000426177 609 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 AC098859.1-201ENST00000502915 1238 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.67□□□□□ -0.22
CDRT1O95170 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 KRT126P-201ENST00000549467 1181 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 PDPK2P-202ENST00000562415 1191 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.67□□□□□ -0.22
CDRT1O95170 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.67□□□□□ -0.22
CDRT1O95170 AC097359.3-201ENST00000603982 1210 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.67□□□□□ -0.22
CDRT1O95170 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDRT1O95170 AL136982.4-201ENST00000437689 1740 ntBASIC13.67□□□□□ -0.22
CDRT1O95170 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDRT1O95170 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.66□□□□□ -0.22
CDRT1O95170 RPL13AP23-201ENST00000480739 586 ntBASIC13.66□□□□□ -0.22
CDRT1O95170 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 AC112191.1-201ENST00000523689 701 ntBASIC13.66□□□□□ -0.22
CDRT1O95170 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.66□□□□□ -0.22
CDRT1O95170 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 HNRNPUP1-201ENST00000554987 333 ntBASIC13.66□□□□□ -0.22
CDRT1O95170 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.66□□□□□ -0.22
CDRT1O95170 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.66□□□□□ -0.22
CDRT1O95170 AC099522.2-201ENST00000607001 744 ntBASIC13.66□□□□□ -0.22
CDRT1O95170 SPTSSB-204ENST00000617024 1292 ntBASIC13.66□□□□□ -0.22
CDRT1O95170 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.66□□□□□ -0.22
CDRT1O95170 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.66□□□□□ -0.22
CDRT1O95170 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.66□□□□□ -0.22
CDRT1O95170 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CDRT1O95170 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDRT1O95170 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
CDRT1O95170 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDRT1O95170 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms