Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCL21O00585 AL160314.3-201ENST00000556041 767 ntBASIC13.31□□□□□ -0.28
CCL21O00585 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CCL21O00585 AC006453.1-201ENST00000636037 1257 ntBASIC13.31□□□□□ -0.28
CCL21O00585 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL21O00585 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL21O00585 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.31□□□□□ -0.28
CCL21O00585 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL21O00585 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL21O00585 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CCL21O00585 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL21O00585 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL21O00585 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL21O00585 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 NKILA-202ENST00000614771 2598 ntBASIC13.3□□□□□ -0.28
CCL21O00585 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL21O00585 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL21O00585 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 NOC2LP1-201ENST00000450578 752 ntBASIC13.3□□□□□ -0.28
CCL21O00585 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL21O00585 AC019193.1-201ENST00000506678 823 ntBASIC13.3□□□□□ -0.28
CCL21O00585 AC116345.2-201ENST00000512837 523 ntBASIC13.3□□□□□ -0.28
CCL21O00585 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL21O00585 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 AC103988.2-201ENST00000561804 725 ntBASIC13.3□□□□□ -0.28
CCL21O00585 SNORD3B-2-202ENST00000571722 791 ntBASIC13.3□□□□□ -0.28
CCL21O00585 MIR4783-201ENST00000580343 82 ntBASIC13.3□□□□□ -0.28
CCL21O00585 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 AP003419.4-201ENST00000616071 517 ntBASIC13.3□□□□□ -0.28
CCL21O00585 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 COX6A1P2-201ENST00000620597 330 ntBASIC13.3□□□□□ -0.28
CCL21O00585 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 AL360270.3-201ENST00000609118 1348 ntBASIC13.3□□□□□ -0.28
CCL21O00585 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL21O00585 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL21O00585 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL21O00585 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL21O00585 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL21O00585 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL21O00585 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCL21O00585 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL21O00585 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL21O00585 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL21O00585 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL21O00585 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms