Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AC144522.1-201ENST00000625111 1658 ntBASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AC078991.1-201ENST00000437297 610 ntBASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AL035414.1-201ENST00000451327 857 ntBASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AC006122.1-201ENST00000493323 440 ntBASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CRAMP1Q96RY5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 PKD1P1-201ENST00000458669 6805 ntBASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.33■□□□□ 0.53
CRAMP1Q96RY5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AC026320.2-201ENST00000434379 478 ntBASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 GCOM2-201ENST00000509133 1104 ntBASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AC138894.2-201ENST00000602838 371 ntBASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 AL109837.1-201ENST00000603272 613 ntBASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 YRDCP1-201ENST00000621419 643 ntBASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CRAMP1Q96RY5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRAMP1Q96RY5 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms