Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.16■□□□□ 0.34
SHC4Q6S5L8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 AC015656.1-201ENST00000624209 3578 ntBASIC17.16■□□□□ 0.34
SHC4Q6S5L8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 RRP7BP-205ENST00000566851 833 ntBASIC17.16■□□□□ 0.34
SHC4Q6S5L8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC4Q6S5L8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 KRT8P14-201ENST00000414254 1442 ntBASIC17.15■□□□□ 0.34
SHC4Q6S5L8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC092183.1-201ENST00000469884 875 ntBASIC17.15■□□□□ 0.34
SHC4Q6S5L8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SPDYE22P-201ENST00000582158 798 ntBASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC093813.1-201ENST00000605066 256 ntBASIC17.15■□□□□ 0.34
SHC4Q6S5L8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 AC027601.5-201ENST00000624065 2482 ntBASIC17.15■□□□□ 0.34
SHC4Q6S5L8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC4Q6S5L8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SHC4Q6S5L8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SHC4Q6S5L8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 LINC01230-201ENST00000625222 3017 ntBASIC17.14■□□□□ 0.33
SHC4Q6S5L8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms