Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 HLA-DQB1-202ENST00000399079 1501 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC011270.2-201ENST00000624293 2550 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 MIR6720-201ENST00000611664 98 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PCDHA1-201ENST00000378133 2726 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 GOLGA2P7-209ENST00000560408 745 ntBASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AL022334.2-201ENST00000610000 484 ntBASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC023024.2-201ENST00000623561 1993 ntBASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AP001527.2-201ENST00000614441 631 ntBASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 CSNK1G2P1-201ENST00000442675 955 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms