Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.62■□□□□ 0.57
DDR1Q08345 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.62■□□□□ 0.57
DDR1Q08345 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.61■□□□□ 0.57
DDR1Q08345 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DDR1Q08345 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 MIR1227-201ENST00000408484 88 ntBASIC18.61■□□□□ 0.57
DDR1Q08345 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.61■□□□□ 0.57
DDR1Q08345 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDR1Q08345 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.61■□□□□ 0.57
DDR1Q08345 AC025262.2-201ENST00000623975 1056 ntBASIC18.61■□□□□ 0.57
DDR1Q08345 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDR1Q08345 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.61■□□□□ 0.57
DDR1Q08345 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDR1Q08345 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
DDR1Q08345 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.6■□□□□ 0.57
DDR1Q08345 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDR1Q08345 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DDR1Q08345 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 AL592076.1-201ENST00000424448 303 ntBASIC18.6■□□□□ 0.57
DDR1Q08345 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.6■□□□□ 0.57
DDR1Q08345 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.6■□□□□ 0.57
DDR1Q08345 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.6■□□□□ 0.57
DDR1Q08345 SIGLEC18P-201ENST00000602271 909 ntBASIC18.6■□□□□ 0.57
DDR1Q08345 AC084781.1-201ENST00000613737 656 ntBASIC18.6■□□□□ 0.57
DDR1Q08345 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.6■□□□□ 0.57
DDR1Q08345 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.6■□□□□ 0.57
DDR1Q08345 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDR1Q08345 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.6■□□□□ 0.57
DDR1Q08345 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDR1Q08345 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDR1Q08345 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.59■□□□□ 0.57
DDR1Q08345 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDR1Q08345 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.59■□□□□ 0.57
DDR1Q08345 AL627422.1-201ENST00000434104 580 ntBASIC18.59■□□□□ 0.57
DDR1Q08345 AC018463.1-201ENST00000456674 917 ntBASIC18.59■□□□□ 0.57
DDR1Q08345 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.59■□□□□ 0.57
DDR1Q08345 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDR1Q08345 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDR1Q08345 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.59■□□□□ 0.57
DDR1Q08345 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.59■□□□□ 0.57
DDR1Q08345 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDR1Q08345 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDR1Q08345 AC027601.3-201ENST00000622907 509 ntBASIC18.59■□□□□ 0.57
DDR1Q08345 AL132780.4-201ENST00000624870 1135 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms