Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.78□□□□□ -0.2
CDK5Q00535 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 AC010327.5-201ENST00000586923 3061 ntBASIC13.78□□□□□ -0.2
CDK5Q00535 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.77□□□□□ -0.2
CDK5Q00535 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CDK5Q00535 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDK5Q00535 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 MIR574-201ENST00000385209 96 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.77□□□□□ -0.21
CDK5Q00535 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.77□□□□□ -0.21
CDK5Q00535 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDK5Q00535 AP000344.2-201ENST00000512987 629 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.77□□□□□ -0.21
CDK5Q00535 MBLAC2-202ENST00000514906 1936 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.77□□□□□ -0.21
CDK5Q00535 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 AC074044.1-201ENST00000609673 707 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 MIR6080-201ENST00000617359 66 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 AP001059.3-201ENST00000619053 235 ntBASIC13.77□□□□□ -0.21
CDK5Q00535 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDK5Q00535 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 SPDYE7P-202ENST00000420373 878 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms