Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LBX1P52954 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 AP000354.1-201ENST00000396982 456 ntBASIC16.74■□□□□ 0.27
LBX1P52954 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 CFL1P6-201ENST00000400899 494 ntBASIC16.74■□□□□ 0.27
LBX1P52954 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 PGAM1P11-201ENST00000416729 680 ntBASIC16.74■□□□□ 0.27
LBX1P52954 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.74■□□□□ 0.27
LBX1P52954 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 MIR2278-201ENST00000516344 96 ntBASIC16.74■□□□□ 0.27
LBX1P52954 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.74■□□□□ 0.27
LBX1P52954 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.74■□□□□ 0.27
LBX1P52954 SIGLEC22P-201ENST00000599104 714 ntBASIC16.74■□□□□ 0.27
LBX1P52954 AP006248.1-201ENST00000610471 67 ntBASIC16.74■□□□□ 0.27
LBX1P52954 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.74■□□□□ 0.27
LBX1P52954 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LBX1P52954 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LBX1P52954 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.74■□□□□ 0.27
LBX1P52954 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 AHCYP4-201ENST00000419201 1315 ntBASIC16.73■□□□□ 0.27
LBX1P52954 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 PP12613-201ENST00000424958 2230 ntBASIC16.73■□□□□ 0.27
LBX1P52954 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.73■□□□□ 0.27
LBX1P52954 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 TPT1P6-201ENST00000458298 514 ntBASIC16.73■□□□□ 0.27
LBX1P52954 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LBX1P52954 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.73■□□□□ 0.27
LBX1P52954 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 AC091304.3-201ENST00000566500 716 ntBASIC16.73■□□□□ 0.27
LBX1P52954 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC16.73■□□□□ 0.27
LBX1P52954 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LBX1P52954 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LBX1P52954 RNF216P1-203ENST00000404404 2427 ntBASIC16.72■□□□□ 0.27
LBX1P52954 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LBX1P52954 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 MST1L-201ENST00000442552 2185 ntBASIC16.72■□□□□ 0.27
LBX1P52954 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.72■□□□□ 0.27
LBX1P52954 ASS1P2-201ENST00000439895 1223 ntBASIC16.72■□□□□ 0.27
LBX1P52954 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.72■□□□□ 0.27
LBX1P52954 AL035414.1-201ENST00000451327 857 ntBASIC16.72■□□□□ 0.27
LBX1P52954 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
LBX1P52954 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 ACTBP9-201ENST00000587663 1099 ntBASIC16.72■□□□□ 0.27
LBX1P52954 CSTP2-201ENST00000610599 398 ntBASIC16.72■□□□□ 0.27
LBX1P52954 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms