Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AC007541.1-201ENST00000570282 1469 ntBASIC14.67□□□□□ -0.06
HTR1EP28566 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HTR1EP28566 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.67□□□□□ -0.06
HTR1EP28566 AC027601.5-201ENST00000624065 2482 ntBASIC14.67□□□□□ -0.06
HTR1EP28566 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HTR1EP28566 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HTR1EP28566 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HTR1EP28566 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HTR1EP28566 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 AC138969.3-201ENST00000546612 1459 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 AC138932.2-201ENST00000548268 1459 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 AC126755.4-201ENST00000549796 1459 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.66□□□□□ -0.06
HTR1EP28566 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.66□□□□□ -0.06
HTR1EP28566 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 HLA-V-204ENST00000476601 1289 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.66□□□□□ -0.06
HTR1EP28566 HILS1-202ENST00000545329 423 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.66□□□□□ -0.06
HTR1EP28566 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.66□□□□□ -0.06
HTR1EP28566 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.66□□□□□ -0.06
HTR1EP28566 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.66□□□□□ -0.06
HTR1EP28566 AC007967.4-201ENST00000614700 386 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 INTS4P1-203ENST00000641008 3683 ntBASIC14.66□□□□□ -0.06
HTR1EP28566 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
HTR1EP28566 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HTR1EP28566 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR1EP28566 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR1EP28566 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR1EP28566 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HTR1EP28566 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.65□□□□□ -0.06
HTR1EP28566 AP3S2-216ENST00000617003 1561 ntBASIC14.65□□□□□ -0.06
HTR1EP28566 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HTR1EP28566 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR1EP28566 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 BEND3P1-201ENST00000421591 1944 ntBASIC14.65□□□□□ -0.06
HTR1EP28566 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
HTR1EP28566 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 AC098614.1-201ENST00000368528 745 ntBASIC14.65□□□□□ -0.06
HTR1EP28566 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR1EP28566 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms