Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AP001059.3-201ENST00000619053 235 ntBASIC14.23□□□□□ -0.13
TNFRSF1BP20333 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AC006504.5-208ENST00000588784 2401 ntBASIC14.23□□□□□ -0.13
TNFRSF1BP20333 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 RPSAP43-201ENST00000402237 625 ntBASIC14.22□□□□□ -0.13
TNFRSF1BP20333 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SERBP1P3-201ENST00000459980 809 ntBASIC14.22□□□□□ -0.13
TNFRSF1BP20333 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SPDYE12P-201ENST00000618416 771 ntBASIC14.22□□□□□ -0.13
TNFRSF1BP20333 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 SBF1P1-201ENST00000444527 5631 ntBASIC14.22□□□□□ -0.13
TNFRSF1BP20333 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFRSF1BP20333 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 AL928921.2-201ENST00000641325 2442 ntBASIC14.21□□□□□ -0.13
TNFRSF1BP20333 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 SPDYE7P-202ENST00000420373 878 ntBASIC14.21□□□□□ -0.13
TNFRSF1BP20333 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 MIR3687-2-201ENST00000577708 61 ntBASIC14.21□□□□□ -0.13
TNFRSF1BP20333 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 MIR3687-1-201ENST00000614492 61 ntBASIC14.21□□□□□ -0.13
TNFRSF1BP20333 AL109936.8-201ENST00000641772 604 ntBASIC14.21□□□□□ -0.13
TNFRSF1BP20333 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms