Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CLUP10909 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.83□□□□□ -0.2
CLUP10909 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLUP10909 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLUP10909 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 AL080243.2-201ENST00000418783 582 ntBASIC13.82□□□□□ -0.2
CLUP10909 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 AC023141.5-201ENST00000458585 616 ntBASIC13.82□□□□□ -0.2
CLUP10909 AC112482.1-201ENST00000492080 688 ntBASIC13.82□□□□□ -0.2
CLUP10909 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.82□□□□□ -0.2
CLUP10909 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.82□□□□□ -0.2
CLUP10909 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.82□□□□□ -0.2
CLUP10909 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.82□□□□□ -0.2
CLUP10909 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.82□□□□□ -0.2
CLUP10909 AC025048.3-201ENST00000590609 569 ntBASIC13.82□□□□□ -0.2
CLUP10909 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 AC011467.4-201ENST00000594891 528 ntBASIC13.82□□□□□ -0.2
CLUP10909 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 AC005702.4-201ENST00000618393 416 ntBASIC13.82□□□□□ -0.2
CLUP10909 LINC00628-201ENST00000628516 1289 ntBASIC13.82□□□□□ -0.2
CLUP10909 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.82□□□□□ -0.2
CLUP10909 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.82□□□□□ -0.2
CLUP10909 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLUP10909 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 Z97205.2-201ENST00000564697 1639 ntBASIC13.82□□□□□ -0.2
CLUP10909 AC067750.1-201ENST00000608826 6545 ntBASIC13.82□□□□□ -0.2
CLUP10909 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.82□□□□□ -0.2
CLUP10909 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.82□□□□□ -0.2
CLUP10909 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLUP10909 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.82□□□□□ -0.2
CLUP10909 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
CLUP10909 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
CLUP10909 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CLUP10909 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.81□□□□□ -0.2
CLUP10909 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLUP10909 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms