Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 U62317.3-201ENST00000608319 855 ntBASIC19.11■□□□□ 0.65
SCN11AQ9UI33 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 AL162727.3-201ENST00000635661 2787 ntBASIC19.11■□□□□ 0.65
SCN11AQ9UI33 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN11AQ9UI33 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 AC026316.1-201ENST00000398900 414 ntBASIC19.1■□□□□ 0.65
SCN11AQ9UI33 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN11AQ9UI33 AC092135.3-201ENST00000624151 1846 ntBASIC19.09■□□□□ 0.65
SCN11AQ9UI33 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 RN7SL258P-201ENST00000478664 300 ntBASIC19.09■□□□□ 0.65
SCN11AQ9UI33 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 AC138035.3-201ENST00000622706 2791 ntBASIC19.09■□□□□ 0.65
SCN11AQ9UI33 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 AP000358.1-201ENST00000456260 156 ntBASIC19.09■□□□□ 0.65
SCN11AQ9UI33 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN11AQ9UI33 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 AHCYP4-201ENST00000419201 1315 ntBASIC19.08■□□□□ 0.65
SCN11AQ9UI33 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms