Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 MTHFR-210ENST00000641407 2387 ntBASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AC092580.3-201ENST00000430932 139 ntBASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AC067863.1-201ENST00000494933 530 ntBASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AC018529.2-202ENST00000611482 3087 ntBASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.73□□□□□ -0.05
LRTM1Q9HBL6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 AL158211.3-201ENST00000607385 239 ntBASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 LILRP1-201ENST00000444199 1370 ntBASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 AC067750.1-201ENST00000608826 6545 ntBASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms