Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM3Q9BZL3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC015802.1-201ENST00000588104 1449 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AL513480.1-201ENST00000451731 511 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 FGFR3P6-201ENST00000457012 610 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 FAM86EP-206ENST00000510506 987 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC136632.2-201ENST00000512891 861 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 IGHV3-65-201ENST00000523210 341 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC008608.2-201ENST00000606089 416 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC116407.4-201ENST00000623319 1061 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AL645728.2-201ENST00000641974 660 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AC018442.1-201ENST00000421439 2061 ntBASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM3Q9BZL3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms