Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 C18orf15-201ENST00000623680 2534 ntBASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC112693.3-201ENST00000624819 1983 ntBASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AL080243.2-201ENST00000418783 582 ntBASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC004449.1-201ENST00000564240 433 ntBASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC139530.3-201ENST00000620344 690 ntBASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CHRDL1Q9BU40 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AC126365.1-201ENST00000578585 1514 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 TUBB3P1-201ENST00000405796 1332 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms