Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 DRAXINP1-201ENST00000437611 948 ntBASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 AP002383.4-201ENST00000442518 975 ntBASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3IPQ96QF0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 MIR5100-201ENST00000579544 119 ntBASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 AP002414.4-201ENST00000589764 1148 ntBASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 AL139385.1-201ENST00000611744 3272 ntBASIC14.95□□□□□ -0.02
RAB3IPQ96QF0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAB3IPQ96QF0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms