Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 TARDBPP1-201ENST00000442013 1203 ntBASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AC079316.1-201ENST00000548397 411 ntBASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 BRI3BPP1-201ENST00000594224 787 ntBASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 C1QBPP1-201ENST00000400117 770 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TMEM14DP-201ENST00000422205 345 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 FAM21FP-201ENST00000426241 1131 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 AC092658.1-201ENST00000505836 891 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 MTHFR-217ENST00000641820 1569 ntBASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LRRC46Q96FV0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC46Q96FV0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC46Q96FV0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC46Q96FV0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms