Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.41■□□□□ 0.22
COLGALT1Q8NBJ5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLGALT1Q8NBJ5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.41■□□□□ 0.22
COLGALT1Q8NBJ5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 TSPY26P-202ENST00000565928 3884 ntBASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 EIF3FP3-201ENST00000434851 1086 ntBASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PPY2P-201ENST00000582808 702 ntBASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLGALT1Q8NBJ5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CICP13-201ENST00000422015 2789 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 AL662890.1-201ENST00000396818 632 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 LINC00554-201ENST00000564841 3011 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 AC092850.2-201ENST00000623821 2697 ntBASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLGALT1Q8NBJ5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 POM121L8P-201ENST00000417732 1281 ntBASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.38■□□□□ 0.21
COLGALT1Q8NBJ5 POM121L9P-203ENST00000441984 1285 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms