Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.78□□□□□ -0.04
LETMD1Q6P1Q0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LETMD1Q6P1Q0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LETMD1Q6P1Q0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 DRD5P1-201ENST00000456605 1438 ntBASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 AC113367.3-201ENST00000508316 1912 ntBASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LETMD1Q6P1Q0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 AP001267.2-201ENST00000532619 2086 ntBASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 AC015656.1-201ENST00000624209 3578 ntBASIC14.77□□□□□ -0.05
LETMD1Q6P1Q0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AC093525.8-201ENST00000624099 1342 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 HLA-K-203ENST00000430151 1046 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 FAM86LP-201ENST00000478302 853 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AC036164.1-201ENST00000570544 333 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 AC107373.2-201ENST00000607735 490 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 BX640514.1-201ENST00000583223 1918 ntBASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LETMD1Q6P1Q0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms