Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 AC005829.1-201ENST00000570002 483 ntBASIC13.61□□□□□ -0.23
ODF4Q2M2E3 MIR4469-201ENST00000583919 79 ntBASIC13.61□□□□□ -0.23
ODF4Q2M2E3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 AP000845.1-201ENST00000581677 2131 ntBASIC13.61□□□□□ -0.23
ODF4Q2M2E3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ODF4Q2M2E3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 RPL5P21-201ENST00000404620 815 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AC004461.1-201ENST00000412461 403 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AL627223.1-201ENST00000416693 442 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AC093520.2-201ENST00000561830 333 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 RN7SL828P-201ENST00000607615 303 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 MTHFR-210ENST00000641407 2387 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ODF4Q2M2E3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ODF4Q2M2E3 AC097359.2-201ENST00000604992 2389 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms