Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HMGA2P52926 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HMGA2P52926 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HMGA2P52926 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.92□□□□□ -0.18
HMGA2P52926 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.92□□□□□ -0.18
HMGA2P52926 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.92□□□□□ -0.18
HMGA2P52926 DNAJB3-201ENST00000446806 729 ntBASIC13.92□□□□□ -0.18
HMGA2P52926 AC023141.5-201ENST00000458585 616 ntBASIC13.92□□□□□ -0.18
HMGA2P52926 POLD2P1-201ENST00000511220 997 ntBASIC13.92□□□□□ -0.18
HMGA2P52926 AC051619.7-201ENST00000568314 623 ntBASIC13.92□□□□□ -0.18
HMGA2P52926 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HMGA2P52926 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMGA2P52926 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMGA2P52926 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGA2P52926 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 AL645937.2-201ENST00000396808 931 ntBASIC13.91□□□□□ -0.18
HMGA2P52926 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HMGA2P52926 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 HLA-K-203ENST00000430151 1046 ntBASIC13.91□□□□□ -0.18
HMGA2P52926 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.91□□□□□ -0.18
HMGA2P52926 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.91□□□□□ -0.18
HMGA2P52926 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
HMGA2P52926 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.91□□□□□ -0.18
HMGA2P52926 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TEX28P1-201ENST00000613479 1221 ntBASIC13.91□□□□□ -0.18
HMGA2P52926 TEX28P2-201ENST00000617764 1221 ntBASIC13.91□□□□□ -0.18
HMGA2P52926 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.91□□□□□ -0.18
HMGA2P52926 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMGA2P52926 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
HMGA2P52926 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMGA2P52926 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 AC093525.8-201ENST00000624099 1342 ntBASIC13.9□□□□□ -0.18
HMGA2P52926 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGA2P52926 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGA2P52926 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.9□□□□□ -0.18
HMGA2P52926 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGA2P52926 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms