Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.264e-7■■□□□ 14
U2AF2P26368 ZNF10-204ENST00000536704 531 ntTSL 413.16□□□□□ -0.34e-7■■□□□ 14
U2AF2P26368 ZNF10-210ENST00000543271 559 ntTSL 412.97□□□□□ -0.334e-7■■□□□ 14
U2AF2P26368 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.644e-7■■□□□ 14
U2AF2P26368 ZNF10-209ENST00000540927 590 ntTSL 410.34□□□□□ -0.754e-7■■□□□ 14
U2AF2P26368 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.984e-7■■□□□ 14
U2AF2P26368 ZNF10-205ENST00000536877 472 ntTSL 48.7□□□□□ -1.024e-7■■□□□ 14
U2AF2P26368 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.655e-8■■□□□ 14
U2AF2P26368 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.32■■■□□ 2.65e-8■■□□□ 14
U2AF2P26368 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.09■■■□□ 2.575e-8■■□□□ 14
U2AF2P26368 FTCD-212ENST00000498355 1936 ntTSL 230.86■■■□□ 2.535e-8■■□□□ 14
U2AF2P26368 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.325e-8■■□□□ 14
U2AF2P26368 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.363e-6■■□□□ 14
U2AF2P26368 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.82□□□□□ -1.83e-6■■□□□ 14
U2AF2P26368 A2M-209ENST00000539638 590 ntTSL 45.86□□□□□ -1.476e-28■■□□□ 14
U2AF2P26368 A2M-202ENST00000404455 623 ntTSL 55.86□□□□□ -1.476e-28■■□□□ 14
U2AF2P26368 TANK-223ENST00000494976 636 ntTSL 314.48□□□□□ -0.096e-7■■□□□ 14
U2AF2P26368 TANK-216ENST00000461338 674 ntTSL 39.9□□□□□ -0.826e-7■■□□□ 14
U2AF2P26368 AC015813.1-201ENST00000582096 2483 nt9.3□□□□□ -0.928e-17■■□□□ 14
U2AF2P26368 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.528e-17■■□□□ 14
U2AF2P26368 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.07□□□□□ -1.68e-17■■□□□ 14
U2AF2P26368 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)23.05■■□□□ 1.284e-50■■□□□ 14
U2AF2P26368 SRSF2-209ENST00000586778 1001 ntTSL 23.73□□□□□ -1.811e-13■■□□□ 14
U2AF2P26368 ECHDC1-221ENST00000531582 531 ntTSL 45.54□□□□□ -1.521e-6■■□□□ 14
U2AF2P26368 ECHDC1-213ENST00000474240 482 ntTSL 21.69□□□□□ -2.141e-6■■□□□ 14
U2AF2P26368 C22orf39-204ENST00000509549 2979 ntTSL 213.93□□□□□ -0.181e-7■■□□□ 13.9
U2AF2P26368 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.541e-6■■□□□ 13.9
U2AF2P26368 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.08■□□□□ 0.974e-7■■□□□ 13.9
U2AF2P26368 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.26■□□□□ 0.514e-7■■□□□ 13.9
U2AF2P26368 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.274e-7■■□□□ 13.9
U2AF2P26368 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.14e-7■■□□□ 13.9
U2AF2P26368 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)14.91□□□□□ -0.024e-7■■□□□ 13.9
U2AF2P26368 DNAJB6-203ENST00000417758 852 ntTSL 512.55□□□□□ -0.44e-7■■□□□ 13.9
U2AF2P26368 NPAS2-202ENST00000427413 625 ntTSL 38.35□□□□□ -1.075e-7■■□□□ 13.9
U2AF2P26368 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.42■□□□□ 0.381e-8■■□□□ 13.9
U2AF2P26368 AAAS-220ENST00000552876 2016 ntTSL 217.31■□□□□ 0.361e-8■■□□□ 13.9
U2AF2P26368 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.223e-6■■□□□ 13.9
U2AF2P26368 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.79■□□□□ 0.121e-8■■□□□ 13.9
U2AF2P26368 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.051e-8■■□□□ 13.9
U2AF2P26368 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -03e-6■■□□□ 13.9
U2AF2P26368 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.073e-6■■□□□ 13.9
U2AF2P26368 AAAS-212ENST00000548931 1075 ntTSL 513.67□□□□□ -0.221e-8■■□□□ 13.9
U2AF2P26368 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC12.74□□□□□ -0.373e-6■■□□□ 13.9
U2AF2P26368 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.493e-6■■□□□ 13.9
U2AF2P26368 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.95□□□□□ -1.33e-6■■□□□ 13.9
U2AF2P26368 FEZ2-207ENST00000414288 556 ntTSL 48.39□□□□□ -1.072e-8■■□□□ 13.9
U2AF2P26368 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.72■□□□□ 0.432e-9■■□□□ 13.9
U2AF2P26368 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.132e-9■■□□□ 13.9
U2AF2P26368 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.79■□□□□ 0.122e-9■■□□□ 13.9
U2AF2P26368 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.072e-9■■□□□ 13.9
U2AF2P26368 UBE2D3-231ENST00000513098 702 ntTSL 313.93□□□□□ -0.183e-9■■□□□ 13.9
U2AF2P26368 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.573e-9■■□□□ 13.9
U2AF2P26368 PAPD4-217ENST00000515807 576 ntTSL 413.7□□□□□ -0.227e-7■■□□□ 13.9
U2AF2P26368 PAPD4-206ENST00000503620 582 ntTSL 39.1□□□□□ -0.957e-7■■□□□ 13.9
U2AF2P26368 PAPD4-209ENST00000505571 781 ntTSL 33.14□□□□□ -1.917e-7■■□□□ 13.9
U2AF2P26368 FOXP1-208ENST00000472382 713 ntTSL 38.55□□□□□ -1.041e-9■■□□□ 13.9
U2AF2P26368 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.83■□□□□ 0.64e-7■■□□□ 13.9
U2AF2P26368 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.454e-7■■□□□ 13.9
U2AF2P26368 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.152e-9■■□□□ 13.9
U2AF2P26368 NEMF-215ENST00000557380 1742 ntTSL 1 (best)9.96□□□□□ -0.823e-14■■□□□ 13.9
U2AF2P26368 FAM114A1-204ENST00000512889 621 ntTSL 36.29□□□□□ -1.43e-7■■□□□ 13.9
U2AF2P26368 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.23e-8■■□□□ 13.9
U2AF2P26368 SRSF5-208ENST00000554929 947 ntTSL 211.74□□□□□ -0.532e-15■■□□□ 13.9
U2AF2P26368 SRSF5-213ENST00000556330 546 ntTSL 211.03□□□□□ -0.642e-15■■□□□ 13.9
U2AF2P26368 SRSF5-216ENST00000556647 644 ntTSL 210.68□□□□□ -0.72e-15■■□□□ 13.9
U2AF2P26368 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.141e-6■■□□□ 13.9
U2AF2P26368 ZNF692-203ENST00000412341 1916 ntTSL 526.21■■□□□ 1.791e-6■■□□□ 13.9
U2AF2P26368 ZNF692-208ENST00000470787 1544 ntTSL 225.94■■□□□ 1.741e-6■■□□□ 13.9
U2AF2P26368 ZNF692-211ENST00000477070 1521 ntTSL 523.87■■□□□ 1.411e-6■■□□□ 13.9
U2AF2P26368 CENPT-201ENST00000436104 1990 ntTSL 223.81■■□□□ 1.43e-8■■□□□ 13.9
U2AF2P26368 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.271e-6■■□□□ 13.9
U2AF2P26368 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.181e-6■■□□□ 13.9
U2AF2P26368 CENPT-207ENST00000562513 1669 ntTSL 521.99■■□□□ 1.113e-8■■□□□ 13.9
U2AF2P26368 CENPT-210ENST00000563885 1931 ntTSL 521.43■■□□□ 1.023e-8■■□□□ 13.9
U2AF2P26368 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.963e-8■■□□□ 13.9
U2AF2P26368 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)20.97■□□□□ 0.951e-6■■□□□ 13.9
U2AF2P26368 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.913e-8■■□□□ 13.9
U2AF2P26368 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.493e-8■■□□□ 13.9
U2AF2P26368 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.12■□□□□ 0.493e-8■■□□□ 13.9
U2AF2P26368 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)18.11■□□□□ 0.491e-6■■□□□ 13.9
U2AF2P26368 CENPT-223ENST00000566758 858 ntTSL 517.58■□□□□ 0.43e-8■■□□□ 13.9
U2AF2P26368 CENPT-211ENST00000564128 2673 ntTSL 216.72■□□□□ 0.273e-8■■□□□ 13.9
U2AF2P26368 CENPT-233ENST00000569862 2957 ntTSL 216.22■□□□□ 0.193e-8■■□□□ 13.9
U2AF2P26368 CENPT-218ENST00000565157 2133 ntTSL 216.03■□□□□ 0.163e-8■■□□□ 13.9
U2AF2P26368 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.113e-10■■□□□ 13.9
U2AF2P26368 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC15.55■□□□□ 0.083e-10■■□□□ 13.9
U2AF2P26368 CENPT-227ENST00000568495 1098 ntTSL 514.09□□□□□ -0.153e-8■■□□□ 13.9
U2AF2P26368 PRR3-204ENST00000481741 1944 ntTSL 213.96□□□□□ -0.173e-10■■□□□ 13.9
U2AF2P26368 PRR3-206ENST00000498336 2005 ntTSL 313.39□□□□□ -0.273e-10■■□□□ 13.9
U2AF2P26368 GTPBP1-208ENST00000475959 475 ntTSL 212.5□□□□□ -0.413e-10■■□□□ 13.9
U2AF2P26368 ITGA1-203ENST00000504669 6276 ntTSL 1 (best)12.16□□□□□ -0.463e-6■■□□□ 13.9
U2AF2P26368 GTPBP1-204ENST00000460605 581 ntTSL 311.67□□□□□ -0.543e-10■■□□□ 13.9
U2AF2P26368 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.613e-10■■□□□ 13.9
U2AF2P26368 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.663e-10■■□□□ 13.9
U2AF2P26368 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.683e-10■■□□□ 13.9
U2AF2P26368 PAN2-205ENST00000547226 2642 ntTSL 510.78□□□□□ -0.683e-10■■□□□ 13.9
U2AF2P26368 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.693e-10■■□□□ 13.9
U2AF2P26368 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.733e-10■■□□□ 13.9
U2AF2P26368 PRR3-203ENST00000470703 3429 ntTSL 29.82□□□□□ -0.843e-10■■□□□ 13.9
U2AF2P26368 PAN2-217ENST00000551359 4685 ntTSL 58.54□□□□□ -1.043e-10■■□□□ 13.9
Retrieved 100 of 36,523 protein–RNA pairs in 264.2 ms