RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
SRSF5-208ENST00000554929 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
SRSF5-208ENST00000554929 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
SRSF5-208ENST00000554929 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
SRSF5-208ENST00000554929 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
SRSF5-208ENST00000554929 ABCC9O60706 1549 aa23.87■■□□□ 1.41
SRSF5-208ENST00000554929 FOXD1Q16676 465 aa23.83■■□□□ 1.41
SRSF5-208ENST00000554929 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
SRSF5-208ENST00000554929 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
SRSF5-208ENST00000554929 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
SRSF5-208ENST00000554929 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
SRSF5-208ENST00000554929 ADRA2BP18089 450 aa22.36■■□□□ 1.17
SRSF5-208ENST00000554929 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
SRSF5-208ENST00000554929 PIAS4Q8N2W9 510 aaPredicted RBP22.23■■□□□ 1.15
SRSF5-208ENST00000554929 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.146e-9■■■■□ 24.4
SRSF5-208ENST00000554929 MSH5O43196 834 aa22.14■■□□□ 1.13
SRSF5-208ENST00000554929 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
SRSF5-208ENST00000554929 NACADO15069 1562 aa21.87■■□□□ 1.09
SRSF5-208ENST00000554929 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
SRSF5-208ENST00000554929 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
SRSF5-208ENST00000554929 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
SRSF5-208ENST00000554929 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
SRSF5-208ENST00000554929 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
SRSF5-208ENST00000554929 POTEDQ86YR6 584 aa21.32■■□□□ 1
SRSF5-208ENST00000554929 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
SRSF5-208ENST00000554929 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
SRSF5-208ENST00000554929 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
SRSF5-208ENST00000554929 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
SRSF5-208ENST00000554929 CUX2O14529 1486 aa20.86■□□□□ 0.93
SRSF5-208ENST00000554929 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
SRSF5-208ENST00000554929 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
SRSF5-208ENST00000554929 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
SRSF5-208ENST00000554929 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
SRSF5-208ENST00000554929 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
SRSF5-208ENST00000554929 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
SRSF5-208ENST00000554929 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
SRSF5-208ENST00000554929 NESP48681 1621 aa20.24■□□□□ 0.83
SRSF5-208ENST00000554929 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
SRSF5-208ENST00000554929 PPP4R3CPQ6ZMV5 832 aa20.2■□□□□ 0.82
SRSF5-208ENST00000554929 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
SRSF5-208ENST00000554929 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
SRSF5-208ENST00000554929 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
SRSF5-208ENST00000554929 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
SRSF5-208ENST00000554929 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
SRSF5-208ENST00000554929 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
SRSF5-208ENST00000554929 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
SRSF5-208ENST00000554929 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
SRSF5-208ENST00000554929 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
SRSF5-208ENST00000554929 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
SRSF5-208ENST00000554929 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
SRSF5-208ENST00000554929 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
SRSF5-208ENST00000554929 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SRSF5-208ENST00000554929 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
SRSF5-208ENST00000554929 WDR62O43379 1518 aa19.66■□□□□ 0.74
SRSF5-208ENST00000554929 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
SRSF5-208ENST00000554929 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
SRSF5-208ENST00000554929 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
SRSF5-208ENST00000554929 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
SRSF5-208ENST00000554929 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
SRSF5-208ENST00000554929 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
SRSF5-208ENST00000554929 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
SRSF5-208ENST00000554929 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
SRSF5-208ENST00000554929 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
SRSF5-208ENST00000554929 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
SRSF5-208ENST00000554929 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
SRSF5-208ENST00000554929 MROH2BQ7Z745 1585 aa19.38■□□□□ 0.69
SRSF5-208ENST00000554929 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
SRSF5-208ENST00000554929 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
SRSF5-208ENST00000554929 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
SRSF5-208ENST00000554929 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
SRSF5-208ENST00000554929 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
SRSF5-208ENST00000554929 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
SRSF5-208ENST00000554929 CFTRP13569 1480 aa19.16■□□□□ 0.66
SRSF5-208ENST00000554929 WIZO95785 1651 aa19.12■□□□□ 0.65
SRSF5-208ENST00000554929 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
SRSF5-208ENST00000554929 FBLN2P98095 1184 aa19.08■□□□□ 0.64
SRSF5-208ENST00000554929 KCNA4P22459 653 aa19.05■□□□□ 0.64
SRSF5-208ENST00000554929 CHD1O14646 1710 aa19.05■□□□□ 0.64
SRSF5-208ENST00000554929 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
SRSF5-208ENST00000554929 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
SRSF5-208ENST00000554929 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
SRSF5-208ENST00000554929 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
SRSF5-208ENST00000554929 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
SRSF5-208ENST00000554929 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
SRSF5-208ENST00000554929 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
SRSF5-208ENST00000554929 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
SRSF5-208ENST00000554929 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
SRSF5-208ENST00000554929 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
SRSF5-208ENST00000554929 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
SRSF5-208ENST00000554929 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
SRSF5-208ENST00000554929 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
SRSF5-208ENST00000554929 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
SRSF5-208ENST00000554929 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
SRSF5-208ENST00000554929 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
SRSF5-208ENST00000554929 TDRD9Q8NDG6 1382 aaKnown RBP18.69■□□□□ 0.58
SRSF5-208ENST00000554929 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
SRSF5-208ENST00000554929 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
SRSF5-208ENST00000554929 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
SRSF5-208ENST00000554929 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
SRSF5-208ENST00000554929 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms