RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-221ENST00000531582 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
ECHDC1-221ENST00000531582 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-221ENST00000531582 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
ECHDC1-221ENST00000531582 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
ECHDC1-221ENST00000531582 FOXD1Q16676 465 aa13.15□□□□□ -0.3
ECHDC1-221ENST00000531582 ADRA2BP18089 450 aa12.72□□□□□ -0.37
ECHDC1-221ENST00000531582 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
ECHDC1-221ENST00000531582 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-221ENST00000531582 MSH5O43196 834 aa12.21□□□□□ -0.45
ECHDC1-221ENST00000531582 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
ECHDC1-221ENST00000531582 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-221ENST00000531582 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-221ENST00000531582 KCNA4P22459 653 aa11.71□□□□□ -0.53
ECHDC1-221ENST00000531582 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
ECHDC1-221ENST00000531582 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-221ENST00000531582 NPM3O75607 178 aaKnown RBP11.44□□□□□ -0.58
ECHDC1-221ENST00000531582 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
ECHDC1-221ENST00000531582 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
ECHDC1-221ENST00000531582 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
ECHDC1-221ENST00000531582 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-221ENST00000531582 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
ECHDC1-221ENST00000531582 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
ECHDC1-221ENST00000531582 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
ECHDC1-221ENST00000531582 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
ECHDC1-221ENST00000531582 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
ECHDC1-221ENST00000531582 FOXD4L1Q9NU39 408 aa10.84□□□□□ -0.67
ECHDC1-221ENST00000531582 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
ECHDC1-221ENST00000531582 ZBTB22O15209 634 aa10.72□□□□□ -0.69
ECHDC1-221ENST00000531582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.698e-8■■■■□ 21.5
ECHDC1-221ENST00000531582 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-221ENST00000531582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.59□□□□□ -0.71
ECHDC1-221ENST00000531582 HNRNPUL2Q1KMD3 747 aaKnown RBP10.59□□□□□ -0.71
ECHDC1-221ENST00000531582 ATXN8OSP0DMR3 200 aa10.52□□□□□ -0.73
ECHDC1-221ENST00000531582 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-221ENST00000531582 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
ECHDC1-221ENST00000531582 APLP2Q06481 763 aa10.48□□□□□ -0.73
ECHDC1-221ENST00000531582 RNF39Q9H2S5 420 aa10.4□□□□□ -0.74
ECHDC1-221ENST00000531582 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-221ENST00000531582 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-221ENST00000531582 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-221ENST00000531582 CAPN15O75808 1086 aa10.15□□□□□ -0.78
ECHDC1-221ENST00000531582 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-221ENST00000531582 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-221ENST00000531582 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
ECHDC1-221ENST00000531582 POLA2Q14181 598 aa9.99□□□□□ -0.81
ECHDC1-221ENST00000531582 ZBTB12Q9Y330 459 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-221ENST00000531582 FBLN2P98095 1184 aa9.95□□□□□ -0.82
ECHDC1-221ENST00000531582 DSG3P32926 999 aa9.93□□□□□ -0.82
ECHDC1-221ENST00000531582 ABCB7O75027 752 aa9.89□□□□□ -0.83
ECHDC1-221ENST00000531582 FKBP8Q14318 412 aa9.82□□□□□ -0.84
ECHDC1-221ENST00000531582 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
ECHDC1-221ENST00000531582 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
ECHDC1-221ENST00000531582 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
ECHDC1-221ENST00000531582 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
ECHDC1-221ENST00000531582 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
ECHDC1-221ENST00000531582 ZNF692Q9BU19 519 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-221ENST00000531582 OSCARQ8IYS5 282 aa9.6□□□□□ -0.87
ECHDC1-221ENST00000531582 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-221ENST00000531582 FBXO3Q9UK99 471 aa9.58□□□□□ -0.88
ECHDC1-221ENST00000531582 PROM2Q8N271 834 aa9.57□□□□□ -0.88
ECHDC1-221ENST00000531582 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
ECHDC1-221ENST00000531582 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
ECHDC1-221ENST00000531582 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
ECHDC1-221ENST00000531582 STAG3Q9UJ98 1225 aa9.45□□□□□ -0.9
ECHDC1-221ENST00000531582 SPDYE1Q8NFV5 336 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-221ENST00000531582 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
ECHDC1-221ENST00000531582 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
ECHDC1-221ENST00000531582 REM2Q8IYK8 340 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-221ENST00000531582 AMER1Q5JTC6 1135 aaPredicted RBP9.28□□□□□ -0.92
ECHDC1-221ENST00000531582 PLCD3Q8N3E9 789 aa9.23□□□□□ -0.93
ECHDC1-221ENST00000531582 ZBTB47Q9UFB7 747 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-221ENST00000531582 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
ECHDC1-221ENST00000531582 MIER1Q8N108 512 aa9.22□□□□□ -0.93
ECHDC1-221ENST00000531582 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
ECHDC1-221ENST00000531582 IFNLR1Q8IU57 520 aaPredicted RBP9.17□□□□□ -0.94
ECHDC1-221ENST00000531582 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
ECHDC1-221ENST00000531582 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
ECHDC1-221ENST00000531582 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
ECHDC1-221ENST00000531582 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-221ENST00000531582 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
ECHDC1-221ENST00000531582 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
ECHDC1-221ENST00000531582 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
ECHDC1-221ENST00000531582 FXR2P51116 673 aaKnown RBP eCLIP9□□□□□ -0.97
ECHDC1-221ENST00000531582 GSE1Q14687 1217 aa8.98□□□□□ -0.97
ECHDC1-221ENST00000531582 TRIM41Q8WV44 630 aa8.97□□□□□ -0.97
ECHDC1-221ENST00000531582 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-221ENST00000531582 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-221ENST00000531582 MYT1Q01538 1121 aa8.95□□□□□ -0.98
ECHDC1-221ENST00000531582 NUBP1P53384 320 aa8.93□□□□□ -0.98
ECHDC1-221ENST00000531582 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
ECHDC1-221ENST00000531582 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-221ENST00000531582 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
ECHDC1-221ENST00000531582 PIP4P2Q8N4L2 257 aa8.92□□□□□ -0.98
ECHDC1-221ENST00000531582 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-221ENST00000531582 PKD2Q13563 968 aa8.91□□□□□ -0.98
ECHDC1-221ENST00000531582 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
ECHDC1-221ENST00000531582 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-221ENST00000531582 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-221ENST00000531582 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms