Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP8P22894 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MMP8P22894 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP8P22894 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
MMP8P22894 ACKR1-201ENST00000368121 1240 ntBASIC16.02■□□□□ 0.16
MMP8P22894 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP8P22894 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP8P22894 KLF2P2-201ENST00000416807 1039 ntBASIC16.02■□□□□ 0.16
MMP8P22894 HMGN1P19-201ENST00000436976 333 ntBASIC16.02■□□□□ 0.16
MMP8P22894 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.02■□□□□ 0.16
MMP8P22894 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP8P22894 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP8P22894 CLUHP6-201ENST00000580789 941 ntBASIC16.02■□□□□ 0.16
MMP8P22894 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.02■□□□□ 0.16
MMP8P22894 AP005019.2-201ENST00000615104 511 ntBASIC16.02■□□□□ 0.16
MMP8P22894 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.02■□□□□ 0.16
MMP8P22894 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP8P22894 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.02■□□□□ 0.15
MMP8P22894 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
MMP8P22894 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.02■□□□□ 0.15
MMP8P22894 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.02■□□□□ 0.15
MMP8P22894 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP8P22894 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 AC140479.7-201ENST00000636301 2332 ntBASIC16.01■□□□□ 0.15
MMP8P22894 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
MMP8P22894 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
MMP8P22894 AL162726.2-201ENST00000438986 1017 ntBASIC16.01■□□□□ 0.15
MMP8P22894 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP8P22894 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP8P22894 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP8P22894 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP8P22894 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP8P22894 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP8P22894 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MMP8P22894 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16■□□□□ 0.15
MMP8P22894 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16■□□□□ 0.15
MMP8P22894 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
MMP8P22894 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16■□□□□ 0.15
MMP8P22894 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MMP8P22894 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16■□□□□ 0.15
MMP8P22894 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
MMP8P22894 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16■□□□□ 0.15
MMP8P22894 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms