Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.05■□□□□ 0.8
APAF1O14727 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20.05■□□□□ 0.8
APAF1O14727 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.05■□□□□ 0.8
APAF1O14727 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.05■□□□□ 0.8
APAF1O14727 TTTY23B-201ENST00000442790 549 ntBASIC20.05■□□□□ 0.8
APAF1O14727 AC026434.2-201ENST00000506094 1078 ntBASIC20.05■□□□□ 0.8
APAF1O14727 SLC25A47P1-201ENST00000531577 414 ntBASIC20.05■□□□□ 0.8
APAF1O14727 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.05■□□□□ 0.8
APAF1O14727 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
APAF1O14727 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.04■□□□□ 0.8
APAF1O14727 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC20.04■□□□□ 0.8
APAF1O14727 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APAF1O14727 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 AC013726.1-201ENST00000563747 2285 ntBASIC20.04■□□□□ 0.8
APAF1O14727 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APAF1O14727 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.04■□□□□ 0.8
APAF1O14727 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.04■□□□□ 0.8
APAF1O14727 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.04■□□□□ 0.8
APAF1O14727 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
APAF1O14727 AC004466.1-201ENST00000599515 1080 ntBASIC20.04■□□□□ 0.8
APAF1O14727 AC145423.3-201ENST00000615987 467 ntBASIC20.04■□□□□ 0.8
APAF1O14727 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC20.04■□□□□ 0.8
APAF1O14727 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.04■□□□□ 0.8
APAF1O14727 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
APAF1O14727 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.04■□□□□ 0.8
APAF1O14727 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APAF1O14727 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APAF1O14727 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.03■□□□□ 0.8
APAF1O14727 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
APAF1O14727 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.03■□□□□ 0.8
APAF1O14727 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 GIMAP3P-201ENST00000495150 836 ntBASIC20.03■□□□□ 0.8
APAF1O14727 AC022616.1-201ENST00000518688 554 ntBASIC20.03■□□□□ 0.8
APAF1O14727 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.03■□□□□ 0.8
APAF1O14727 GNRHR2-203ENST00000581100 1187 ntBASIC20.03■□□□□ 0.8
APAF1O14727 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
APAF1O14727 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.03■□□□□ 0.8
APAF1O14727 AC055811.4-201ENST00000624039 1754 ntBASIC20.03■□□□□ 0.8
APAF1O14727 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APAF1O14727 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
APAF1O14727 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms